RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ITPKBP27987 946 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 CHN2P52757 468 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 SNAP47Q5SQN1 464 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 PDPK2PQ6A1A2 396 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 PHYKPLQ8IUZ5 450 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 GRIN3AQ8TCU5 1115 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 RXFP2Q8WXD0 754 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 FAM118BQ9BPY3 351 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 HGH1Q9BTY7 390 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 MZT2BQ6NZ67 158 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ZBTB49Q6ZSB9 765 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 HDDC3Q8N4P3 179 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 IPCEF1Q8WWN9 437 aaPredicted RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 EDEM1Q92611 657 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 VAT1Q99536 393 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 TBL1YQ9BQ87 522 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 SLC35C2Q9NQQ7 365 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 CLIC5Q9NZA1 410 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 CKLFQ9UBR5 152 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 LIMD1Q9UGP4 676 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 INVSQ9Y283 1065 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 HACD1B0YJ81 288 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 RECQL5O94762 991 aaPredicted RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 IFNGP01579 166 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 IGKV5-2P06315 115 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 UBA1P22314 1058 aaKnown RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 SP3Q02447 781 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 GRM3Q14832 879 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 TBCELQ5QJ74 424 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 TMEM164Q5U3C3 297 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 KLHDC7AQ5VTJ3 777 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 TTC37Q6PGP7 1564 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 MOXD1Q6UVY6 613 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 C16orf59Q7L2K0 433 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 CENPSQ8N2Z9 138 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 FBXO36Q8NEA4 188 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 FBXO22Q8NEZ5 403 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 RORBQ92753 470 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 GULP1Q9UBP9 304 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ADORA2AP29274 412 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 SLC7A2P52569 658 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 HK2P52789 917 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 DMTNQ08495 405 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 NOGQ13253 232 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 NR1D2Q14995 579 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF473Q8WTR7 871 aaKnown RBP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 CISHQ9NSE2 258 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 PDP2Q9P2J9 529 aa11.36□□□□□ -0.59
SCN4A-201ENST00000435607 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.36□□□□□ -0.59
SCN4A-201ENST00000435607 BTN3A1O00481 513 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 LARGE1O95461 756 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CASRP41180 1078 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 PHF21BQ96EK2 531 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 APOL2Q9BQE5 337 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 A0A0B4J269 797 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 EIF3HO15372 352 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 KHDRBS3O75525 346 aaKnown RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 EPORP19235 508 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 LSM12Q3MHD2 195 aaKnown RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 KCNMB4Q86W47 210 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 MID1IP1Q9NPA3 183 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 RPS6KA6Q9UK32 745 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 KCNH1O95259 989 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CCNYL3P0C7X3 344 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 INSRRP14616 1297 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CYP2C18P33260 490 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TTC7BQ86TV6 843 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 COL23A1Q86Y22 540 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TMC8Q8IU68 726 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CPNE1Q99829 537 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 MLPHQ9BV36 600 aaPredicted RBP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 PIF1Q9H611 641 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ASB7Q9H672 318 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TLE6Q9H808 572 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 UBP1Q9NZI7 540 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CEP170Q5SW79 1584 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SIN3BO75182 1162 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 NR2F1P10589 423 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 IRF8Q02556 426 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 DDI2Q5TDH0 399 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ULK3Q6PHR2 472 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ARMC8Q8IUR7 673 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 DAW1Q8N136 415 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 IL17RAQ96F46 866 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 SEC16BQ96JE7 1060 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 TBCBQ99426 244 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 ZNF208O43345 1280 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CDC25CP30307 473 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCN4A-201ENST00000435607 OR5T3Q8NGG3 340 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 OR10G6Q8NH81 332 aa11.35□□□□□ -0.59
SCN4A-201ENST00000435607 CHAMP1Q96JM3 812 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms