RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 COG7P83436 770 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 UBAP2LQ14157 1087 aaKnown RBP18.96■□□□□ 0.63
CLK1-205ENST00000434813 RCN1Q15293 331 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 TSGA13Q96PP4 275 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 PKMYT1Q99640 499 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 CEP350Q5VT06 3117 aa18.96■□□□□ 0.63
CLK1-205ENST00000434813 SHROOM3Q8TF72 1996 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ATP9BO43861 1147 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 CACNG3O60359 315 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 KRT36O76013 467 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 PSMG1O95456 288 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 MYL4P12829 197 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 PRKAR2AP13861 404 aaKnown RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 BDNFP23560 247 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ARRB2P32121 409 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ABCE1P61221 599 aaKnown RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 KDSRQ06136 332 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 CDH17Q12864 832 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 MPP3Q13368 585 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 PRPSAP1Q14558 356 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 HSP90AA5PQ58FG0 334 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 NAPEPLDQ6IQ20 393 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ATG14Q6ZNE5 492 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 MAVSQ7Z434 540 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 METTL23Q86XA0 190 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ATXN7L3BQ96GX2 97 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ZNF358Q9NW07 568 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 DNAH12Q6ZR08 3092 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 F8W8V4 182 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ZNF623O75123 536 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 TM7SF2O76062 418 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 JCHAINP01591 159 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 RPLP2P05387 115 aaKnown RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 ELNP15502 786 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 RAB27AP51159 221 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 EIF4EBP2Q13542 120 aaPredicted RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 STMN2Q93045 179 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 AZIN2Q96A70 460 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 CELF6Q96J87 481 aaKnown RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 FAM161BQ96MY7 647 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 AGO3Q9H9G7 860 aaKnown RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 C20orf96Q9NUD7 363 aaPredicted RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 RNF186Q9NXI6 227 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 ARHGEF38Q9NXL2 777 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 DSEQ9UL01 958 aa18.95■□□□□ 0.62
CLK1-205ENST00000434813 APOBEC2Q9Y235 224 aaKnown RBP18.95■□□□□ 0.62
CLK1-205ENST00000434813 PTPRDP23468 1912 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 FNDC1Q4ZHG4 1894 aaPredicted RBP18.94■□□□□ 0.62
CLK1-205ENST00000434813 A0A096LPK6 155 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 PSMD3O43242 534 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 KLHL2O95198 593 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 HOXD10P28358 340 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 GMPRP36959 345 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 ITGA9Q13797 1035 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 NAA25Q14CX7 972 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 LINC00523Q86TU6 105 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 PLD6Q8N2A8 252 aaKnown RBP18.94■□□□□ 0.62
CLK1-205ENST00000434813 RNF34Q969K3 372 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 APOL2Q9BQE5 337 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 CHRAC1Q9NRG0 131 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 NSMCE4AQ9NXX6 385 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 PCDHB12Q9Y5F1 795 aa18.94■□□□□ 0.62
CLK1-205ENST00000434813 M0QZQ0 153 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 ZNF195O14628 629 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 ADAMTS4O75173 837 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 B3GAT3O94766 335 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 ASGR1P07306 291 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 ATP6V1C1P21283 382 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 CCND3P30281 292 aaPredicted RBP18.93■□□□□ 0.62
CLK1-205ENST00000434813 HOXC13P31276 330 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 HADHAP40939 763 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 CSRP3P50461 194 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 NKX3-2P78367 333 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 CCDC6Q16204 474 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 TSNAXIP1Q2TAA8 658 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 TRMT5Q32P41 509 aaKnown RBP18.93■□□□□ 0.62
CLK1-205ENST00000434813 NET1Q7Z628 596 aaPredicted RBP18.93■□□□□ 0.62
CLK1-205ENST00000434813 SCUBE1Q8IWY4 988 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 CNTD1Q8N815 330 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 URGCPQ8TCY9 931 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 VPS39Q96JC1 886 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 KIFC1Q9BW19 673 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 TMLHEQ9NVH6 421 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 PNPOQ9NVS9 261 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 STX18Q9P2W9 335 aaKnown RBP18.93■□□□□ 0.62
CLK1-205ENST00000434813 NLRC5Q86WI3 1866 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 E2F8A0AVK6 867 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 IRAK2O43187 625 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 TRPA1O75762 1119 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 ACADSP16219 412 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 HTR7P34969 479 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 VHLP40337 213 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 BRCC3P46736 316 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 IDH3AP50213 366 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 CD300LGQ6UXG3 332 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 ULK2Q8IYT8 1036 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 OR10T2Q8NGX3 314 aa18.93■□□□□ 0.62
CLK1-205ENST00000434813 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.93■□□□□ 0.62
CLK1-205ENST00000434813 TMEM114B3SHH9 223 aa18.92■□□□□ 0.62
CLK1-205ENST00000434813 G3V2L1 256 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms