RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PCID2Q5JVF3 399 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 CERCAMQ5T4B2 595 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 IRGCQ6NXR0 463 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TAC4Q86UU9 113 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 LRRC49Q8IUZ0 686 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TP53INP2Q8IXH6 220 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 NPWQ8N729 165 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 EDEM1Q92611 657 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
CD44-210ENST00000434472 FCRL5Q96RD9 977 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 HAPLN3Q96S86 360 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 THTPAQ9BU02 230 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 SENP6Q9GZR1 1112 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 CDH19Q9H159 772 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 CATSPERBQ9H7T0 1116 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 ANLNQ9NQW6 1124 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 IARS2Q9NSE4 1012 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 PNPOQ9NVS9 261 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 MIOSQ9NXC5 875 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 ARHGEF38Q9NXL2 777 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 CORO1CQ9ULV4 474 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 TIMM13Q9Y5L4 95 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 SLCO1B7G3V0H7 640 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 USP12O75317 370 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 SNUPNO95149 360 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 IGHA2P01877 340 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 C2P06681 752 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 CACNA2D1P54289 1103 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 ACTR3P61158 418 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TSPY1Q01534 308 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 ITGA9Q13797 1035 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TIGD5Q53EQ6 642 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 HSP90AA5PQ58FG0 334 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TMCO4Q5TGY1 634 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 C1orf146Q5VVC0 180 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TIGD7Q6NT04 549 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 EPGNQ6UW88 154 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 AGMOQ6ZNB7 445 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 CMC1Q7Z7K0 106 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 MYLK4Q86YV6 388 aaPredicted RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 PPHLN1Q8NEY8 458 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 DQX1Q8TE96 717 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 WDR60Q8WVS4 1066 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 VPS39Q96JC1 886 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 GPR22Q99680 433 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 TBL1YQ9BQ87 522 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 MCMBPQ9BTE3 642 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 RHOJQ9H4E5 214 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 NMRAL1Q9HBL8 299 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 SPC25Q9HBM1 224 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 MRM3Q9HC36 420 aaKnown RBP10.62□□□□□ -0.71
CD44-210ENST00000434472 ABCC13Q9NSE7 274 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 NMRK1Q9NWW6 199 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 FNIP2Q9P278 1114 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 LRCH1Q9Y2L9 728 aa10.62□□□□□ -0.71
CD44-210ENST00000434472 COL4A4P53420 1690 aaPredicted RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 G3V2L1 256 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 M0QZQ0 153 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 ZNF195O14628 629 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 SLC22A2O15244 555 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 IRAK2O43187 625 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 SIN3BO75182 1162 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 CABYRO75952 493 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 IGLV3-25P01717 112 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 TYMPP19971 482 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 HOXC13P31276 330 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 CPOXP36551 454 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 KPNA2P52292 529 aaKnown RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 SESN3P58005 492 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 MGAT3Q09327 533 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 GRIK3Q13003 919 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 SLC12A1Q13621 1099 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 BTBD8Q5XKL5 378 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 TRIM68Q6AZZ1 485 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 PKN3Q6P5Z2 889 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 POTEHQ6S545 545 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 C17orf99Q6UX52 265 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 ZYG11AQ6WRX3 759 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 RIPOR1Q6ZS17 1223 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 ADGRG6Q86SQ4 1221 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 SERINC5Q86VE9 423 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 ATPAF2Q8N5M1 289 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 C3orf58Q8NDZ4 430 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 GABPB2Q8TAK5 448 aaPredicted RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 SCG3Q8WXD2 468 aaKnown RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 JADE3Q92613 823 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 DPF3Q92784 378 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 LPPQ93052 612 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 MFSD3Q96ES6 412 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 AGAP2Q99490 1192 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 IL12RB2Q99665 862 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 RTP3Q9BQQ7 232 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 ILKAPQ9H0C8 392 aaPredicted RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 GLOD4Q9HC38 313 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 VTI1BQ9UEU0 232 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 RAP2CQ9Y3L5 183 aa10.61□□□□□ -0.71
CD44-210ENST00000434472 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.61□□□□□ -0.71
CD44-210ENST00000434472 CASTOR2A6NHX0 329 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms