RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 IL10RBQ08334 325 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 NR1H3Q13133 447 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 SLC12A1Q13621 1099 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 KCTD19Q17RG1 926 aaPredicted RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 PTCRAQ6ISU1 281 aaPredicted RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 CPA6Q8N4T0 437 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 GLIS1Q8NBF1 620 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 CCHCR1Q8TD31 782 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 LMLNQ96KR4 655 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 ERP44Q9BS26 406 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 TRIM51Q9BSJ1 452 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 RAB17Q9H0T7 212 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 SP110Q9HB58 689 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 PCDH9Q9HC56 1237 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 ATP13A1Q9HD20 1204 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 HPCAL4Q9UM19 191 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 FAM50BQ9Y247 325 aa27.05■■□□□ 1.92
TMEM248-205ENST00000433271 UTP11Q9Y3A2 253 aaKnown RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 NYNRINQ9P2P1 1898 aaKnown RBP27.05■■□□□ 1.92
TMEM248-205ENST00000433271 SPTBN5Q9NRC6 3674 aaKnown RBP27.04■■□□□ 1.92
TMEM248-205ENST00000433271 J3KR12 359 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 CTIFO43310 598 aaKnown RBP27.04■■□□□ 1.92
TMEM248-205ENST00000433271 KDELR3O43731 214 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 PRAMEF11O60813 436 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 GCATO75600 419 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 STK10O94804 968 aaKnown RBP27.04■■□□□ 1.92
TMEM248-205ENST00000433271 HEXIM1O94992 359 aaKnown RBP27.04■■□□□ 1.92
TMEM248-205ENST00000433271 ETS1P14921 441 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 CSKP41240 450 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 WASHC5Q12768 1159 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 LMAN2Q12907 356 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 RUNX3Q13761 415 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 P3H1Q32P28 736 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 NXPE3Q969Y0 559 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 XPO6Q96QU8 1125 aaKnown RBP27.04■■□□□ 1.92
TMEM248-205ENST00000433271 SEPT10Q9P0V9 454 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 VPS28Q9UK41 221 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 FBXO10Q9UK96 956 aa27.04■■□□□ 1.92
TMEM248-205ENST00000433271 TARSL2A2RTX5 802 aaKnown RBP27.03■■□□□ 1.92
TMEM248-205ENST00000433271 OTOL1A6NHN0 477 aaPredicted RBP27.03■■□□□ 1.92
TMEM248-205ENST00000433271 RNF103O00237 685 aa27.03■■□□□ 1.92
TMEM248-205ENST00000433271 HLA-FP30511 346 aa27.03■■□□□ 1.92
TMEM248-205ENST00000433271 CD70P32970 193 aa27.03■■□□□ 1.92
TMEM248-205ENST00000433271 PLK1P53350 603 aa27.03■■□□□ 1.92
TMEM248-205ENST00000433271 NRLP54845 237 aa27.03■■□□□ 1.92
TMEM248-205ENST00000433271 TRIP13Q15645 432 aaPredicted RBP27.03■■□□□ 1.92
TMEM248-205ENST00000433271 MAFAQ8NHW3 353 aaPredicted RBP27.03■■□□□ 1.92
TMEM248-205ENST00000433271 VAT1Q99536 393 aa27.03■■□□□ 1.92
TMEM248-205ENST00000433271 ZSCAN5DPP0CG00 497 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 CCNB1P14635 433 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 ACTN2P35609 894 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 IFI35P80217 286 aaPredicted RBP27.02■■□□□ 1.92
TMEM248-205ENST00000433271 PRUNE1Q86TP1 453 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 NAT16Q8N8M0 369 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 MAML1Q92585 1016 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 ANKZF1Q9H8Y5 726 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 ABCB8Q9NUT2 735 aa27.02■■□□□ 1.92
TMEM248-205ENST00000433271 A0A0A0MRY4 1105 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 ARNTLO00327 626 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 PEX11BO96011 259 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 PTPN3P26045 913 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 GUCY2DQ02846 1103 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 HNRNPDQ14103 355 aaKnown RBP27.01■■□□□ 1.92
TMEM248-205ENST00000433271 DUPD1Q68J44 220 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 ASTLQ6HA08 431 aaPredicted RBP27.01■■□□□ 1.92
TMEM248-205ENST00000433271 GPR161Q8N6U8 529 aaKnown RBP27.01■■□□□ 1.92
TMEM248-205ENST00000433271 DCAF4L2Q8NA75 395 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 SPATA13Q96N96 652 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 ZNF599Q96NL3 588 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 BRD9Q9H8M2 597 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 PDFQ9HBH1 243 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 LIMD1Q9UGP4 676 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 ASIC3Q9UHC3 531 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 TRHDEQ9UKU6 1024 aa27.01■■□□□ 1.92
TMEM248-205ENST00000433271 CBX4O00257 560 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 RPL22P35268 128 aaKnown RBP27.01■■□□□ 1.91
TMEM248-205ENST00000433271 RENBPP51606 427 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 GAB4Q2WGN9 574 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 PLEKHG6Q3KR16 790 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 TEX44Q53QW1 395 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 C4orf22Q6V702 233 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 ETFBKMTQ8IXQ9 262 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 APCDD1Q8J025 514 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 CCDC110Q8TBZ0 833 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 NSMCE1Q8WV22 266 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 SEC14L1Q92503 715 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 HINFPQ9BQA5 517 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 C2orf49Q9BVC5 232 aaPredicted RBP27.01■■□□□ 1.91
TMEM248-205ENST00000433271 EPC1Q9H2F5 836 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 GTSE1Q9NYZ3 720 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 PAK5Q9P286 719 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 GGA2Q9UJY4 613 aa27.01■■□□□ 1.91
TMEM248-205ENST00000433271 SHROOM3Q8TF72 1996 aa27■■□□□ 1.91
TMEM248-205ENST00000433271 ZSCAN5CA6NGD5 496 aaPredicted RBP27■■□□□ 1.91
TMEM248-205ENST00000433271 OPHN1O60890 802 aa27■■□□□ 1.91
TMEM248-205ENST00000433271 ZMPSTE24O75844 475 aa27■■□□□ 1.91
TMEM248-205ENST00000433271 JCHAINP01591 159 aa27■■□□□ 1.91
TMEM248-205ENST00000433271 PABPC1P11940 636 aaKnown RBP27■■□□□ 1.91
TMEM248-205ENST00000433271 ADCY8P40145 1251 aa27■■□□□ 1.91
TMEM248-205ENST00000433271 DRG2P55039 364 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms