RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 NUDCD3Q8IVD9 361 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 TP53INP2Q8IXH6 220 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX56-204ENST00000431640 NETO2Q8NC67 525 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 OR52K1Q8NGK4 314 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 E2F7Q96AV8 911 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 CERS2Q96G23 380 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 SIK2Q9H0K1 926 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 SAR1AQ9NR31 198 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 COMMD8Q9NX08 183 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 GGT7Q9UJ14 662 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 PCDHB5Q9Y5E4 795 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 NLRC5Q86WI3 1866 aa13.1□□□□□ -0.31
DDX56-204ENST00000431640 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 HMX2A2RU54 273 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 LCHNA4D1U4 455 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 OR6C75A6NL08 312 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 KCNU1A8MYU2 1149 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 NT5C1B-RDH14C9J2C7 533 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 MGRN1O60291 552 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 GLRA3O75311 464 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 UNC5CO95185 931 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 NQO1P15559 274 aaKnown RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 BGNP21810 368 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 CD68P34810 354 aaPredicted RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 PSEN1P49768 467 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 ARFIP2P53365 341 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 PDE1BQ01064 536 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 SMARCB1Q12824 385 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 CDH17Q12864 832 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 RIPK1Q13546 671 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 BMPR2Q13873 1038 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 MSANTD2Q6P1R3 559 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 FCRL2Q96LA5 508 aaPredicted RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 C7orf26Q96N11 449 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 MYLK2Q9H1R3 596 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 SIRPGQ9P1W8 387 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 TLR6Q9Y2C9 796 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 PRG3Q9Y2Y8 225 aaPredicted RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
DDX56-204ENST00000431640 MRPL42Q9Y6G3 142 aaKnown RBP13.09□□□□□ -0.31
DDX56-204ENST00000431640 CDH23Q9H251 3354 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 MATN3O15232 486 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 HOXA2O43364 376 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 EFCAB14O75071 495 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 GJB5O95377 273 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 ALDH2P05091 517 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 ATP5BP06576 529 aaKnown RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 NFKB1P19838 968 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 HADHAP40939 763 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 CRADDP78560 199 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 HTRA4P83105 476 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 ZBTB17Q13105 803 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 MTA1Q13330 715 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 SHHQ15465 462 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 CDHR3Q6ZTQ4 885 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 ASRGL1Q7L266 308 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 TBC1D1Q86TI0 1168 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 ATPAF2Q8N5M1 289 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 ARMC2Q8NEN0 867 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 ZSCAN18Q8TBC5 510 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 INPP5DQ92835 1189 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 CASP10Q92851 521 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 FCRL5Q96RD9 977 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 VN1R3Q9BXE9 311 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 C12orf65Q9H3J6 166 aaKnown RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 PCMTD2Q9NV79 361 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
DDX56-204ENST00000431640 IL37Q9NZH6 218 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 SFMBT1Q9UHJ3 866 aa13.08□□□□□ -0.32
DDX56-204ENST00000431640 A0A1W2PQH9 124 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms