RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 DDX47Q9H0S4 455 aaKnown RBP13.53□□□□□ -0.24
CDK12-201ENST00000430627 CYP8B1Q9UNU6 501 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 CD163L1Q9NR16 1453 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 ABCC3O15438 1527 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
CDK12-201ENST00000430627 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 HNMTP50135 292 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 OAZ1P54368 228 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 CSTF1Q05048 431 aaKnown RBP13.53□□□□□ -0.24
CDK12-201ENST00000430627 CERCAMQ5T4B2 595 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 TMEM151BQ8IW70 566 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 TMEM156Q8N614 296 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 FATE1Q969F0 183 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 CD84Q9UIB8 345 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 SEPHS1P49903 392 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
CDK12-201ENST00000430627 C11orf88Q6PI97 169 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 RAVER1Q8IY67 606 aaKnown RBP13.53□□□□□ -0.24
CDK12-201ENST00000430627 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
CDK12-201ENST00000430627 A0A0A6YYK5 440 aaPredicted RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 INPPL1O15357 1258 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 MICAL2O94851 1124 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 MMEP08473 750 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 RBP3P10745 1247 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 MSX1P28360 303 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 C3orf67Q6ZVT6 689 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 SPPL2AQ8TCT8 520 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 SERPINB12Q96P63 405 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 LGALS16A8MUM7 142 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 CD3EAPO15446 510 aaKnown RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 OR6B1O95007 311 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 VIL1P09327 827 aaKnown RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.245e-7■■□□□ 13
CDK12-201ENST00000430627 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 RABGGTBP53611 331 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 CSTF3Q12996 717 aaKnown RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 DDI2Q5TDH0 399 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 MFSD7Q6UXD7 560 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 PRUNE1Q86TP1 453 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 CFAP52Q8N1V2 620 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 ZNF366Q8N895 744 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 TRIM4Q9C037 500 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 AVENQ9NQS1 362 aaPredicted RBP13.52□□□□□ -0.24
CDK12-201ENST00000430627 PSMD13Q9UNM6 376 aa13.52□□□□□ -0.24
CDK12-201ENST00000430627 NT5EP21589 574 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 PAICSP22234 425 aaKnown RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 HECTD2Q5U5R9 776 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 SYT12Q8IV01 421 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 EMC1Q8N766 993 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 PPP1R10Q96QC0 940 aaKnown RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 POLR1EQ9GZS1 481 aaKnown RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 CCDC188H7C350 402 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 TNFP01375 233 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 ARF5P84085 180 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 RHAGQ02094 409 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 ATP6AP1LQ52LC2 224 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 EID3Q8N140 333 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 GPR156Q8NFN8 814 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 KLF6Q99612 283 aaPredicted RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 SLC12A4Q9UP95 1085 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 TMEM114B3SHH9 223 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 LDB2O43679 373 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 BUD23O43709 281 aaKnown RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 CPNE6O95741 557 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 RPSAP08865 295 aaKnown RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 HNF1BP35680 557 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 HSD17B3P37058 310 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 DDR1Q08345 913 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 SCUBE3Q8IX30 993 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 ACE2Q9BYF1 805 aaPredicted RBP13.52□□□□□ -0.25
CDK12-201ENST00000430627 SH3GLB1Q9Y371 365 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
CDK12-201ENST00000430627 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.51□□□□□ -0.25
CDK12-201ENST00000430627 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.51□□□□□ -0.25
CDK12-201ENST00000430627 BTN3A1O00481 513 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 SOCS7O14512 581 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 SNRPFP62306 86 aaKnown RBP13.51□□□□□ -0.25
CDK12-201ENST00000430627 PTPN11Q06124 597 aaPredicted RBP13.51□□□□□ -0.25
CDK12-201ENST00000430627 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 HIST1H2AAQ96QV6 131 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 TBL1YQ9BQ87 522 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 TMEM120AQ9BXJ8 343 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 CDC23Q9UJX2 597 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 NEU2Q9Y3R4 380 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 TCRBV21S2A2A0A5A6 115 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 CCND3P30281 292 aaPredicted RBP13.51□□□□□ -0.25
CDK12-201ENST00000430627 ALX1Q15699 326 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 ARMC5Q96C12 935 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 TAPBPLQ9BX59 468 aa13.51□□□□□ -0.25
CDK12-201ENST00000430627 TLR9Q9NR96 1032 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms