RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDAC4-202ENST00000430200 VPS51Q9UID3 782 aa12.11□□□□□ -0.47
HDAC4-202ENST00000430200 FZD4Q9ULV1 537 aa12.11□□□□□ -0.47
HDAC4-202ENST00000430200 CA5BQ9Y2D0 317 aa12.11□□□□□ -0.47
HDAC4-202ENST00000430200 ACACAQ13085 2346 aa12.11□□□□□ -0.47
HDAC4-202ENST00000430200 IGLV3-10A0A075B6K4 115 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 TAF4O00268 1085 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 LATO43561 262 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 ZNF821O75541 412 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-202ENST00000430200 MOCS3O95396 460 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 IL1BP01584 269 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 SLC2A3P11169 496 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 RRM1P23921 792 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
HDAC4-202ENST00000430200 CLDN6P56747 220 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 CNTN1Q12860 1018 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 PTP4A2Q12974 167 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 C15orf59Q2T9L4 293 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-202ENST00000430200 GATAD2AQ86YP4 633 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 OR2T34Q8NGX1 318 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 SETD7Q8WTS6 366 aaKnown RBP12.1□□□□□ -0.47
HDAC4-202ENST00000430200 ADAMTS14Q8WXS8 1223 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 ZCCHC14Q8WYQ9 949 aaKnown RBP12.1□□□□□ -0.47
HDAC4-202ENST00000430200 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 NLRC4Q9NPP4 1024 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 ARHGAP20Q9P2F6 1191 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 MSRB2Q9Y3D2 182 aa12.1□□□□□ -0.47
HDAC4-202ENST00000430200 FAM221BA6H8Z2 402 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 E9PAM4 449 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 VILLO15195 856 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 PLRG1O43660 514 aaKnown RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 LSM8O95777 96 aaKnown RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 ADH1BP00325 375 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 CYP1A1P04798 512 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 GOT1P17174 413 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 C5AR1P21730 350 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 MAT2AP31153 395 aaKnown RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 SCNN1AP37088 669 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 CDH4P55283 916 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 POLR2FP61218 127 aaKnown RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 NCAPHQ15003 741 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 DLG2Q15700 870 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 SLC25A52Q3SY17 297 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 BRMS1LQ5PSV4 323 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 PIP5KL1Q5T9C9 394 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 MANEALQ5VSG8 457 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 ERICH1Q86X53 443 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 SPATS2Q86XZ4 545 aaKnown RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 ZDHHC17Q8IUH5 632 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 OR14C36Q8NHC7 312 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 SLC30A5Q8TAD4 765 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 ENOX1Q8TC92 643 aaKnown RBP12.09□□□□□ -0.47
HDAC4-202ENST00000430200 C18orf8Q96DM3 657 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 SPAG5Q96R06 1193 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 OMDQ99983 421 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 STK33Q9BYT3 514 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 TNKS2Q9H2K2 1166 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 PPM1HQ9ULR3 514 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 SCML1Q9UN30 329 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 HS3ST2Q9Y278 367 aa12.09□□□□□ -0.47
HDAC4-202ENST00000430200 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 A0A1B0GTQ1 180 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 DRGXA6NNA5 263 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 FAM72CH0Y354 149 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 FLRT2O43155 660 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 BNIP3LO60238 219 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CLDN11O75508 207 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 ZMPSTE24O75844 475 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CD160O95971 181 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 RHOCP08134 193 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 MMP8P22894 467 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CCT8P50990 548 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CCR5P51681 352 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 RACK1P63244 317 aaKnown RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 ARF5P84085 180 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 ATP11AP98196 1134 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CDR2Q01850 454 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 ZNF177Q13360 481 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 SYCP1Q15431 976 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 CDO1Q16878 200 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 FAM72AQ5TYM5 149 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 FAM72DQ6L9T8 149 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 C22orf39Q6P5X5 142 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 KDM7AQ6ZMT4 941 aa12.08□□□□□ -0.48
HDAC4-202ENST00000430200 SND1Q7KZF4 910 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC4-202ENST00000430200 KANSL1Q7Z3B3 1105 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms