RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FAM124AQ86V42 546 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 MAGEC3Q8TD91 643 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 GDPD5Q8WTR4 605 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 GINS4Q9BRT9 223 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 KLHL31Q9H511 634 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ALG9Q9H6U8 611 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 RIOX1Q9H6W3 641 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 PNPLA6Q8IY17 1366 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 PECAM1P16284 738 aaPredicted RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 PTPN4P29074 926 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 RPL21P46778 160 aaKnown RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 FAAP100Q0VG06 881 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 CCNIQ14094 377 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ZC3H12AQ5D1E8 599 aaKnown RBP15.63■□□□□ 0.09
PTPRF-206ENST00000429895 LRRC74BQ6ZQY2 392 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 TM6SF2Q9BZW4 377 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 ASB7Q9H672 318 aa15.63■□□□□ 0.09
PTPRF-206ENST00000429895 H3BMM5 538 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ATP9AO75110 1047 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 NTRK1P04629 796 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 DGKAP23743 735 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 SKP1P63208 163 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 MTA1Q13330 715 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 PAGE2BQ5JRK9 111 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 KLHL17Q6TDP4 642 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ISLR2Q6UXK2 745 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF605Q86T29 641 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 IPCEF1Q8WWN9 437 aaPredicted RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 UMODL1Q5DID0 1318 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 A0A0B4J269 797 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 BCLAF3A2AJT9 711 aaKnown RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 TISP43B9A030 160 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 FGFR3P22607 806 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 HK2P52789 917 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 CRADDP78560 199 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 C16orf46Q6P387 395 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 DENND6AQ8IWF6 608 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ITFG1Q8TB96 612 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 APOPT1Q96IL0 206 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 HIC2Q96JB3 615 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 SLC4A5Q9BY07 1137 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ARMCX1Q9P291 453 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 SPHKAPQ2M3C7 1700 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 KIF1CO43896 1103 aaKnown RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 PGK1P00558 417 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 IFNGR2P38484 337 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 PFKFB4Q16877 469 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 CDC73Q6P1J9 531 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 LPPQ93052 612 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF558Q96NG5 402 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 KIFC1Q9BW19 673 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ASB8Q9H765 288 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 COG5Q9UP83 839 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 SLC27A5Q9Y2P5 690 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 A0A087X1B8 175 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 CNGA2Q16280 664 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 OTOP1Q7RTM1 612 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ZC3H7AQ8IWR0 971 aaKnown RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 ZNF671Q8TAW3 534 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 PRCCQ92733 491 aaPredicted RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 TMEM237Q96Q45 408 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 APOL4Q9BPW4 351 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 LDLRP01130 860 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 PTPN1P18031 435 aaKnown RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 C15orf59Q2T9L4 293 aaPredicted RBP15.62■□□□□ 0.09
PTPRF-206ENST00000429895 SNX32Q86XE0 403 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 TERB1Q8NA31 727 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 HELQQ8TDG4 1101 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 TBCBQ99426 244 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 HES2Q9Y543 173 aa15.62■□□□□ 0.09
PTPRF-206ENST00000429895 OR10H2O60403 315 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ADRM1Q16186 407 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 GPAT3Q53EU6 434 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 MIIPQ5JXC2 388 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SERPINA13PQ6UXR4 307 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 UBASH3BQ8TF42 649 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ANKRD7Q92527 254 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 OXNAD1Q96HP4 312 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 UGT2B28Q9BY64 529 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 RAB23Q9ULC3 237 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 MRPS23Q9Y3D9 190 aaKnown RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 STARD13Q9Y3M8 1113 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 IQGAP3Q86VI3 1631 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 TPP1O14773 563 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 CYP1A1P04798 512 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 PSMB4P28070 264 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ATP1A4Q13733 1029 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ZNHIT3Q15649 155 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 FBXO30Q8TB52 745 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 ACTRT2Q8TDY3 377 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SELENOMQ8WWX9 145 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 LENG9Q96B70 501 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 FBXO6Q9NRD1 293 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 SAE1Q9UBE0 346 aaPredicted RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 DAPK2Q9UIK4 370 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 IQCMA0A1B0GVH7 501 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 IL1BP01584 269 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 FAM58BPP0C7Q3 252 aa15.61■□□□□ 0.09
PTPRF-206ENST00000429895 MAPTP10636 758 aaKnown RBP15.61■□□□□ 0.09
PTPRF-206ENST00000429895 TLX1P31314 330 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms