RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ZMPSTE24O75844 475 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 MARCKSL1P49006 195 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 NDST2P52849 883 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 CSTF1Q05048 431 aaKnown RBP22.84■■□□□ 1.25
PTPN18-205ENST00000428843 ANGPT1Q15389 498 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 PARP15Q460N3 678 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 ANKRD20A8PQ5CZ79 823 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 TSSK4Q6SA08 328 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 TMCO3Q6UWJ1 677 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 NT5DC3Q86UY8 548 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 SYCE1Q8N0S2 351 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 ZNF366Q8N895 744 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 KDM1BQ8NB78 822 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 NETO2Q8NC67 525 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 PCDH19Q8TAB3 1148 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 KRT35Q92764 455 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 RNF25Q96BH1 459 aaPredicted RBP22.84■■□□□ 1.25
PTPN18-205ENST00000428843 FAF2Q96CS3 445 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 ERLEC1Q96DZ1 483 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 HMCESQ96FZ2 354 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 HHIPQ96QV1 700 aa22.84■■□□□ 1.25
PTPN18-205ENST00000428843 A0A1W2PQF6 199 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 DGKEP52429 567 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 ODF2Q5BJF6 829 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 AFMIDQ63HM1 303 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 KIAA1211LQ6NV74 962 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 LINGO4Q6UY18 593 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 ZNF354CQ86Y25 554 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 ARHGAP12Q8IWW6 846 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 SLC39A8Q9C0K1 460 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 CD248Q9HCU0 757 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 FBXO4Q9UKT5 387 aa22.83■■□□□ 1.25
PTPN18-205ENST00000428843 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.83■■□□□ 1.25
PTPN18-205ENST00000428843 NYNRINQ9P2P1 1898 aaKnown RBP22.83■■□□□ 1.24
PTPN18-205ENST00000428843 TTC34A8MYJ7 566 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 ZNF487B1APH4 448 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 KDELR3O43731 214 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 FTCDO95954 541 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 MT-CO1P00395 513 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 EPHX1P07099 455 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 TDGF1P13385 188 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 CTNNA2P26232 953 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 CTNNA1P35221 906 aaKnown RBP22.82■■□□□ 1.24
PTPN18-205ENST00000428843 NNMTP40261 264 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 VASPP50552 380 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-205ENST00000428843 ARF5P84085 180 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 SERINC3Q13530 473 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 PEX26Q7Z412 305 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 VSIG1Q86XK7 387 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 KATNAL2Q8IYT4 538 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 LZTR1Q8N653 840 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 TSTD1Q8NFU3 115 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 RNF157Q96PX1 679 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 POLMQ9NP87 494 aaPredicted RBP22.82■■□□□ 1.24
PTPN18-205ENST00000428843 AMFRQ9UKV5 643 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 HPCAL4Q9UM19 191 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 HS3ST2Q9Y278 367 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 PCDHA3Q9Y5H8 950 aa22.82■■□□□ 1.24
PTPN18-205ENST00000428843 TCRBV21S2A2A0A5A6 115 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 STARD3Q14849 445 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 NCBP2-AS2Q69YL0 99 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 RETSATQ6NUM9 610 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 MFSD7Q6UXD7 560 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 TP53INP2Q8IXH6 220 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 SH2D3CQ8N5H7 860 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 CAMKK1Q8N5S9 505 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 PQLC3Q8N755 202 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 PRSS33Q8NF86 280 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 PRRX2Q99811 253 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 MTG2Q9H4K7 406 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 SUN2Q9UH99 717 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 ACTL7AQ9Y615 435 aa22.81■■□□□ 1.24
PTPN18-205ENST00000428843 CCDC66A2RUB6 948 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 ARHGAP42A6NI28 874 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 K7ERQ8 282 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 DFFAO00273 331 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 ATP9BO43861 1147 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 SYNCRIPO60506 623 aaKnown RBP22.8■■□□□ 1.24
PTPN18-205ENST00000428843 APBB3O95704 486 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 SP9P0CG40 484 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 SRCP12931 536 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 SERPINB6P35237 376 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 PAPOLAP51003 745 aaKnown RBP22.8■■□□□ 1.24
PTPN18-205ENST00000428843 DMWDQ09019 674 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 HNRNPA1L2Q32P51 320 aaKnown RBP22.8■■□□□ 1.24
PTPN18-205ENST00000428843 ATP11CQ8NB49 1132 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 FRS2Q8WU20 508 aa22.8■■□□□ 1.24
PTPN18-205ENST00000428843 PACSIN2Q9UNF0 486 aaPredicted RBP22.8■■□□□ 1.24
PTPN18-205ENST00000428843 ZRANB2O95218 330 aaKnown RBP eCLIP22.79■■□□□ 1.24
PTPN18-205ENST00000428843 CD160O95971 181 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 HOXA6P31267 233 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 PXNP49023 591 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-205ENST00000428843 SERPINH1P50454 418 aaKnown RBP22.79■■□□□ 1.24
PTPN18-205ENST00000428843 PEX5P50542 639 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 SLC20A2Q08357 652 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 CAMK2GQ13555 558 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-205ENST00000428843 PAFAH1B3Q15102 231 aaKnown RBP22.79■■□□□ 1.24
PTPN18-205ENST00000428843 DLG2Q15700 870 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 ACCSLQ4AC99 568 aa22.79■■□□□ 1.24
PTPN18-205ENST00000428843 LEKR1Q6ZMV7 388 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms