RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ADCY6O43306 1168 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MYL6P60660 151 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MRPS35P82673 323 aaKnown RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ACSM2AQ08AH3 577 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 C2CD6Q53TS8 623 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SPANXN3Q5MJ09 141 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 FAM46CQ5VWP2 391 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ARMC3Q5W041 872 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ACSM2BQ68CK6 577 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ERLEC1Q96DZ1 483 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PAFAH2Q99487 392 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 BDH2Q9BUT1 245 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 DNPEPQ9ULA0 475 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ZMYND8Q9ULU4 1186 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MRPS23Q9Y3D9 190 aaKnown RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PLEKP08567 350 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 COX7A2P14406 83 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 HOXB8P17481 243 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 FASP25445 335 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 STAT5AP42229 794 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 NDUFV1P49821 464 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 LPIN1Q14693 890 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 CRY2Q49AN0 593 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 FBXO42Q6P3S6 717 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 OTOP1Q7RTM1 612 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 RIOX2Q8IUF8 465 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SCUBE1Q8IWY4 988 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 METTL6Q8TCB7 284 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ATL1Q8WXF7 558 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SLC5A5Q92911 643 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 TRIM63Q969Q1 353 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 TBCBQ99426 244 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 FAM126AQ9BYI3 521 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MID1IP1Q9NPA3 183 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ZMYM5Q9UJ78 669 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 NDUFAF1Q9Y375 327 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 NFASCO94856 1347 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MROH7Q68CQ1 1323 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM150BA6NC51 233 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 KPNA5O15131 536 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 CD3EAPO15446 510 aaKnown RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 EPN2O95208 641 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PGAM1P18669 254 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 RARRES1P49788 294 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 AQP5P55064 265 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 INHBEP58166 350 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 RAET1GQ6H3X3 334 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF605Q86T29 641 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 KCNMB4Q86W47 210 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MCEMP1Q8IX19 187 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ADGRG2Q8IZP9 1017 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM86AQ8N2M4 240 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 FBXL16Q8N461 479 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ASB2Q96Q27 587 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 KCNS3Q9BQ31 491 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SEMA6BQ9H3T3 888 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ELL3Q9HB65 397 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ARL15Q9NXU5 204 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PHLPP1O60346 1717 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MYPNQ86TC9 1320 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 GTPBP1O00178 669 aaKnown RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 KLHL41O60662 606 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PARNO95453 639 aaKnown RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 TARSP26639 723 aaKnown RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 RPA3P35244 121 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MAPK8P45983 427 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF135P52742 658 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-208ENST00000428599 BEX3Q00994 111 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 MAPK7Q13164 816 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 C11orf63Q6NUN7 778 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 BHLHB9Q6PI77 547 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 RAD9BQ6WBX8 426 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ZBTB49Q6ZSB9 765 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 PALB2Q86YC2 1186 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SMYD1Q8NB12 490 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 SPATA5L1Q9BVQ7 753 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 ZNHIT2Q9UHR6 403 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
CTNND1-208ENST00000428599 CCDC85CA6NKD9 419 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 PIK3CDO00329 1044 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SLITRK3O94933 977 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 CCZ1BP86790 482 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 CCZ1P86791 482 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 KPNB1Q14974 876 aaKnown RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 CHADLQ6NUI6 762 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SLC30A9Q6PML9 568 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 SERPINA13PQ6UXR4 307 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 EFCAB3Q8N7B9 438 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 CENPIQ92674 756 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-208ENST00000428599 PHF21BQ96EK2 531 aa9.07□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF624Q9P2J8 865 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms