RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 Q6ZVU0 165 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 STRADAQ7RTN6 431 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 NLRP14Q86W24 1093 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 DRC7Q8IY82 874 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 SH2D3CQ8N5H7 860 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 MCEEQ96PE7 176 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
GPC1-204ENST00000426280 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 MUC3BQ9H195 1237 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 TMEM9BQ9NQ34 198 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 OR12D3Q9UGF7 316 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 VPS28Q9UK41 221 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 MYO6Q9UM54 1294 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 CAPN11Q9UMQ6 739 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
GPC1-204ENST00000426280 A0A1W2PQJ5 194 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 FAM47DPA6NHR8 397 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 MEI4A8MW99 385 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 ARHGAP33O14559 1287 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 KCNK3O14649 394 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 BNIP3LO60238 219 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 LRIG2O94898 1065 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 FSBPO95073 299 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 SEMA4FO95754 770 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 CALB1P05937 261 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
GPC1-204ENST00000426280 FAM193AP78312 1265 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 ARF5P84085 180 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 MAMLD1Q13495 774 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 E2F5Q15329 346 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 CA9Q16790 459 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 DNAJC24Q6P3W2 148 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 LRRC31Q6UY01 552 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 LEKR1Q6ZMV7 388 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 HDDC3Q8N4P3 179 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 CHST14Q8NCH0 376 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 GANCQ8TET4 914 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 SPON2Q9BUD6 331 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
GPC1-204ENST00000426280 ZYG11BQ9C0D3 744 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 KLC2Q9H0B6 622 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 BTBD1Q9H0C5 482 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 OSBPL2Q9H1P3 480 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 NOL6Q9H6R4 1146 aaKnown RBP13.06□□□□□ -0.32
GPC1-204ENST00000426280 GPATCH2LQ9NWQ4 482 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 DNAI1Q9UI46 699 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 PPM1HQ9ULR3 514 aa13.06□□□□□ -0.32
GPC1-204ENST00000426280 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.06□□□□□ -0.32
GPC1-204ENST00000426280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.06□□□□□ -0.32
GPC1-204ENST00000426280 A0A1B0GVT2 93 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 RTN2O75298 545 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 GJB3O75712 270 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 RNASEH2AO75792 299 aaKnown RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 TOP3BO95985 862 aaKnown RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 IL1BP01584 269 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 FTLP02792 175 aaPredicted RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 CD59P13987 128 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 OR1E1P30953 314 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 VASPP50552 380 aaPredicted RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 ZNF143P52747 638 aaPredicted RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 ZBED6P86452 979 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 SULT2A1Q06520 285 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 GRIK2Q13002 908 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 WDR45BQ5MNZ6 344 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 SYCP2LQ5T4T6 812 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 PLEKHA7Q6IQ23 1121 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 SCYL2Q6P3W7 929 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 NCEH1Q6PIU2 408 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 SETD3Q86TU7 594 aaPredicted RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 MINDY1Q8N5J2 469 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 CEP76Q8TAP6 659 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 CAMK1GQ96NX5 476 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 TNKS2Q9H2K2 1166 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 CAAP1Q9H8G2 361 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 PPARGC1AQ9UBK2 798 aaKnown RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 HS3ST2Q9Y278 367 aa13.05□□□□□ -0.32
GPC1-204ENST00000426280 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
GPC1-204ENST00000426280 ILVBLA1L0T0 632 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 TMEM191CA6NGB0 347 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 CBX4O00257 560 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 MCF2LO15068 1137 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 BCAT2O15382 392 aaPredicted RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 WNT1P04628 370 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 TCF4P15884 667 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 GOT1P17174 413 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 HOXD12P35452 270 aa13.04□□□□□ -0.32
GPC1-204ENST00000426280 ADKP55263 362 aaKnown RBP13.04□□□□□ -0.32
GPC1-204ENST00000426280 TAS2R38P59533 333 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms