RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HOXB2P14652 356 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 CTNNA1P35221 906 aaKnown RBP25.05■■□□□ 1.6
VEGFA-209ENST00000425836 ST8SIA6P61647 398 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 PEX26Q7Z412 305 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 VSIG1Q86XK7 387 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 ARHGAP12Q8IWW6 846 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 KATNAL2Q8IYT4 538 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 LZTR1Q8N653 840 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 SLC39A8Q9C0K1 460 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.05■■□□□ 1.6
VEGFA-209ENST00000425836 PCDHA3Q9Y5H8 950 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 RAD54BQ9Y620 910 aa25.05■■□□□ 1.6
VEGFA-209ENST00000425836 ZNF487B1APH4 448 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 K7ESF4 209 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 FTCDO95954 541 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 MT-CO1P00395 513 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 HLA-EP13747 358 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 COL9A1P20849 921 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 CTNNA2P26232 953 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 VASPP50552 380 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-209ENST00000425836 ODF2Q5BJF6 829 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 MFSD7Q6UXD7 560 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 PQLC3Q8N755 202 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 ZNF366Q8N895 744 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 NETO2Q8NC67 525 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 RNF157Q96PX1 679 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 SLC25A13Q9UJS0 675 aa25.04■■□□□ 1.6
VEGFA-209ENST00000425836 DOCK4Q8N1I0 1966 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 KDELR3O43731 214 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 DGKEP52429 567 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 ARF5P84085 180 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 SERINC3Q13530 473 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 KIAA1211LQ6NV74 962 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 TSSK4Q6SA08 328 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 LINGO4Q6UY18 593 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 TP53INP2Q8IXH6 220 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 CD248Q9HCU0 757 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 HS3ST2Q9Y278 367 aa25.03■■□□□ 1.6
VEGFA-209ENST00000425836 CCDC66A2RUB6 948 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 TTC34A8MYJ7 566 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 ZRANB2O95218 330 aaKnown RBP eCLIP25.02■■□□□ 1.64e-17■■□□□ 11.4
VEGFA-209ENST00000425836 EPHX1P07099 455 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 NNMTP40261 264 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 PEX5P50542 639 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 PAPOLAP51003 745 aaKnown RBP25.02■■□□□ 1.6
VEGFA-209ENST00000425836 CSTF1Q05048 431 aaKnown RBP25.02■■□□□ 1.6
VEGFA-209ENST00000425836 ANGPT1Q15389 498 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 RETSATQ6NUM9 610 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 REXO1L1PQ8IX06 675 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 RCOR2Q8IZ40 523 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 ERLEC1Q96DZ1 483 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 HHIPQ96QV1 700 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 HPCAL4Q9UM19 191 aa25.02■■□□□ 1.6
VEGFA-209ENST00000425836 ZSCAN12O43309 604 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 CD160O95971 181 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 TDGF1P13385 188 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 TAZQ16635 292 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 NCBP2-AS2Q69YL0 99 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 ZNF354CQ86Y25 554 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 SH2D3CQ8N5H7 860 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 EXD1Q8NHP7 514 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 MTG2Q9H4K7 406 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 SUN2Q9UH99 717 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 FBXO4Q9UKT5 387 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 PYCARDQ9ULZ3 195 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 PACSIN2Q9UNF0 486 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-209ENST00000425836 ACTL7AQ9Y615 435 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 KMT2EQ8IZD2 1858 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 ARHGAP42A6NI28 874 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 K7ERQ8 282 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 DFFAO00273 331 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 ATP9BO43861 1147 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 SRCP12931 536 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 CDKN2BP42772 138 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 SLC20A2Q08357 652 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 PAFAH1B3Q15102 231 aaKnown RBP25.01■■□□□ 1.59
VEGFA-209ENST00000425836 HNRNPA1L2Q32P51 320 aaKnown RBP25.01■■□□□ 1.59
VEGFA-209ENST00000425836 SPOCD1Q6ZMY3 1216 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 TSTD1Q8NFU3 115 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 FRS2Q8WU20 508 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 ALG3Q92685 438 aa25.01■■□□□ 1.59
VEGFA-209ENST00000425836 POLMQ9NP87 494 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-209ENST00000425836 ATG2BQ96BY7 2078 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 CXorf51AA0A1B0GTR3 108 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 SMAD6O43541 496 aaKnown RBP25■■□□□ 1.59
VEGFA-209ENST00000425836 SYNCRIPO60506 623 aaKnown RBP25■■□□□ 1.59
VEGFA-209ENST00000425836 SERPINB6P35237 376 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 RWDD2BP57060 319 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 STARD3Q14849 445 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 DLG2Q15700 870 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 CAMKK1Q8N5S9 505 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 ATP11CQ8NB49 1132 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 HES6Q96HZ4 224 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 RBM41Q96IZ5 413 aaKnown RBP25■■□□□ 1.59
VEGFA-209ENST00000425836 MAK16Q9BXY0 300 aaKnown RBP25■■□□□ 1.59
VEGFA-209ENST00000425836 PRSS16Q9NQE7 514 aa25■■□□□ 1.59
VEGFA-209ENST00000425836 TCRBV21S2A2A0A5A6 115 aa24.99■■□□□ 1.59
VEGFA-209ENST00000425836 MIF4GDA9UHW6 222 aaKnown RBP24.99■■□□□ 1.59
VEGFA-209ENST00000425836 DDX3YO15523 660 aaKnown RBP24.99■■□□□ 1.59
VEGFA-209ENST00000425836 HOXA6P31267 233 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms