RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NCEH1Q6PIU2 408 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SARM1Q6SZW1 724 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PPP1R21Q6ZMI0 780 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 KIAA0408Q6ZU52 694 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 KANSL1Q7Z3B3 1105 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PPP1R3BQ86XI6 285 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TMPRSS6Q8IU80 811 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 GLB1L2Q8IW92 636 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RHOT2Q8IXI1 618 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CNTROBQ8N137 903 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CDYL2Q8N8U2 506 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD53Q8N9V6 530 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 FAM71DQ8N9W8 422 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 POC5Q8NA72 575 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 OR2I1PQ8NGU4 316 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RASSF8Q8NHQ8 419 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RFWD2Q8NHY2 731 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CPT1CQ8TCG5 803 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF483Q8TF39 744 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SLC5A11Q8WWX8 675 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 NCSTNQ92542 709 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 DDX17Q92841 729 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CASP10Q92851 521 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 NKD2Q969F2 451 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SLC22A18Q96BI1 424 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MIEF2Q96C03 454 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SAAL1Q96ER3 474 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 DYDC2Q96IM9 177 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CEP295NLQ96MC4 621 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 FAM111AQ96PZ2 611 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 GCNAQ96QF7 691 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 DMRTA2Q96SC8 542 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ABHD1Q96SE0 405 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 LBHD1Q9BQE6 289 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 FDXACB1Q9BRP7 624 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ZPBPQ9BS86 351 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MLPHQ9BV36 600 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ANKRD2Q9GZV1 360 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 INTS2Q9H0H0 1204 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MRPL46Q9H2W6 279 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 RWDD1Q9H446 243 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 KAT14Q9H8E8 782 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF304Q9HCX3 659 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 PARPBPQ9NWS1 579 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ZNF70Q9UC06 446 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CLIP2Q9UDT6 1046 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 LEF1Q9UJU2 399 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 APPL1Q9UKG1 709 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 GRID1Q9ULK0 1009 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 USP18Q9UMW8 372 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 SUFUQ9UMX1 484 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 DAPP1Q9UN19 280 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CLDN16Q9Y5I7 305 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TRPV2Q9Y5S1 764 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 KCNE2Q9Y6J6 123 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 ATP8B3O60423 1300 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 TTC21BQ7Z4L5 1316 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 MYPNQ86TC9 1320 aa3.87□□□□□ -1.79
SF3B1-205ENST00000424674 WDR33Q9C0J8 1336 aaKnown RBP3.87□□□□□ -1.79
SF3B1-205ENST00000424674 CYP2D7A0A087X1C5 515 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CTAGE15A4D2H0 777 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 LRRIQ4A6NIV6 560 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 FAM86B1E9PN63 330 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 DNM1LO00429 736 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SEPT4O43236 478 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 DAB1O75553 588 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RASSF9O75901 435 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SEC14L2O76054 403 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 REC8O95072 547 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 PDE8BO95263 885 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NTSR2O95665 410 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 IFNB1P01574 187 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 FYNP06241 537 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CTAGE8P0CG41 777 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CKBP12277 381 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MAKP20794 623 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CASTP20810 708 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 PRDX5P30044 214 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ADRA1BP35368 520 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 SOX6P35712 828 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 IL15P40933 162 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CPA2P48052 419 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NRIP1P48552 1158 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ETV1P50549 477 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MRPL12P52815 198 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 ADAM8P78325 824 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 GBE1Q04446 702 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RUNX1T1Q06455 604 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MGAT5Q09328 741 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 GOLGA8DPQ0D2H9 430 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 KIF5AQ12840 1032 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 NPRL3Q12980 569 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 TARDBPQ13148 414 aaKnown RBP eCLIP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RIPK1Q13546 671 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 BMPR2Q13873 1038 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 RRP1BQ14684 758 aaKnown RBP3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CLCA4Q14CN2 919 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 MYLK3Q32MK0 819 aa3.86□□□□□ -1.79
SF3B1-205ENST00000424674 CRY2Q49AN0 593 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 314.3 ms