RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 TBC1D3DA0A087WVF3 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3IA0A087WXS9 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3EA0A087X179 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3KA0A087X1G2 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3BA6NDS4 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3FA6NER0 549 aaPredicted RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3LB9A6J9 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 SEPT4O43236 478 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 LPXNO60711 386 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PMPCBO75439 489 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 RNASEH2AO75792 299 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 CHRM2P08172 466 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3HP0C7X1 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 CREB1P16220 341 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PGM1P36871 562 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PDE1AP54750 535 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 RPL15P61313 204 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 SUMO2P61956 95 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 RBM6P78332 1123 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 GUCY1B3Q02153 619 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 NUCB1Q02818 461 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 DEUP1Q05D60 604 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 CYP1B1Q16678 543 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 ZNF618Q5T7W0 954 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3GQ6DHY5 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3CQ6IPX1 549 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 ACAD10Q6JQN1 1059 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 C16orf89Q6UX73 402 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 C4orf50Q6ZRC1 276 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 TBC1D3Q8IZP1 549 aaPredicted RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PROKR1Q8TCW9 393 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 SLC2A12Q8TD20 617 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 NPIPB3Q92617 1050 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 FUBP1Q96AE4 644 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 CTHRC1Q96CG8 243 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 MYEOVQ96EZ4 313 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PRR25Q96S07 402 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 AGAP2Q99490 1192 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 CHMP4BQ9H444 224 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 RWDD1Q9H446 243 aaPredicted RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 KCNK9Q9NPC2 374 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 OLA1Q9NTK5 396 aaKnown RBP4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 EHD3Q9NZN3 535 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 DKK2Q9UBU2 259 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 HSF4Q9ULV5 492 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 RCE1Q9Y256 329 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PCDHB2Q9Y5E7 798 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 ANKRD36CQ5JPF3 1778 aa4.55□□□□□ -1.68
SDCBPP2-201ENST00000424643 PALLDQ8WX93 1383 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 SALL3Q9BXA9 1300 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 CCDC187A0A096LP49 1063 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 SAC3D1A6NKF1 404 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 TMEM200CA6NKL6 621 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 VWC2LB2RUY7 222 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ERVV-1B6SEH8 477 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 AP4M1O00189 453 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 CES2O00748 559 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 FOXN1O15353 648 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 YY2O15391 372 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 PROM1O43490 865 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 RTN3O95197 1032 aaPredicted RBP4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 STARD3NLO95772 234 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 CSF1P09603 554 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ITGAMP11215 1152 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 MMP8P22894 467 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ADRA1DP25100 572 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 GRK5P34947 590 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 PIP4K2AP48426 406 aaPredicted RBP4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 TPTEP56180 551 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 E2F1Q01094 437 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 GALNT2Q10471 571 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 CBFBQ13951 182 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 GCKRQ14397 625 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 GPR68Q15743 365 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 SMN1Q16637 294 aaKnown RBP4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 RABL6Q3YEC7 729 aaPredicted RBP4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ANO7Q6IWH7 933 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 CFAP161Q6P656 301 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 VWA1Q6PCB0 445 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 KCNV1Q6PIU1 500 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 PCSK4Q6UW60 755 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 RHOUQ7L0Q8 258 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ZNF34Q8IZ26 560 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 LNX2Q8N448 690 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 RFFLQ8WZ73 363 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 LENG9Q96B70 501 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 RNF125Q96EQ8 232 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 FBXL20Q96IG2 436 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 PGBD1Q96JS3 809 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 NEUROD6Q96NK8 337 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 PIGSQ96S52 555 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 PRRX2Q99811 253 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 CHCHD6Q9BRQ6 235 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ALG8Q9BVK2 526 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 HERC2P3Q9BVR0 1158 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 ARHGAP39Q9C0H5 1083 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 SAP30LQ9HAJ7 183 aa4.54□□□□□ -1.68
SDCBPP2-201ENST00000424643 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms