RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 CXCR3P49682 368 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 POM121L1PQ3SYA9 428 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 SLC45A4Q5BKX6 768 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 DPY19L2P1Q6NXN4 242 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 GALNT15Q8N3T1 639 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 SH2D3CQ8N5H7 860 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 FAM131CQ96AQ9 280 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 TKTL2Q9H0I9 626 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 KDM4CQ9H3R0 1056 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 ANLNQ9NQW6 1124 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 GDF3Q9NR23 364 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 ARHGEF38Q9NXL2 777 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 DACH1Q9UI36 760 aa18.98■□□□□ 0.63
SREBF1-206ENST00000423161 ARID1BQ8NFD5 2236 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-206ENST00000423161 KNTC1P50748 2209 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 FAM170AA1A519 330 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 MCF2LO15068 1137 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 PLRG1O43660 514 aaKnown RBP18.97■□□□□ 0.63
SREBF1-206ENST00000423161 CNTN5O94779 1100 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 RHOCP08134 193 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 CYP11B1P15538 503 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 ZNF18P17022 549 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-206ENST00000423161 DEUP1Q05D60 604 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 CNTN1Q12860 1018 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 FAM102AQ5T9C2 384 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-206ENST00000423161 KLHDC7AQ5VTJ3 777 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 TAF3Q5VWG9 929 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 NAPEPLDQ6IQ20 393 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 PRPF39Q86UA1 669 aaKnown RBP18.97■□□□□ 0.63
SREBF1-206ENST00000423161 PIP4K2CQ8TBX8 421 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 MDM1Q8TC05 714 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 NT5C3BQ969T7 300 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 C18orf8Q96DM3 657 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 PGAP3Q96FM1 320 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-206ENST00000423161 TBCBQ99426 244 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 PPM1HQ9ULR3 514 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 PAXBP1Q9Y5B6 917 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 SNX10Q9Y5X0 201 aa18.97■□□□□ 0.63
SREBF1-206ENST00000423161 TDRD6O60522 2096 aaKnown RBP18.97■□□□□ 0.63
SREBF1-206ENST00000423161 MYLKQ15746 1914 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 I6L893 689 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-206ENST00000423161 YKT6O15498 198 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 F9P00740 461 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 ITGAVP06756 1048 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 SRCP12931 536 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 MAT2AP31153 395 aaKnown RBP18.96■□□□□ 0.63
SREBF1-206ENST00000423161 SCNN1AP37088 669 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 GABRB2P47870 512 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 NXPH1P58417 271 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 KRT83P78385 493 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 KCNMA1Q12791 1236 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 SHBQ15464 509 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 ALFQ53S48 1182 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 AGBL4Q5VU57 503 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 ERICH1Q86X53 443 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 XYLT1Q86Y38 959 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 ZNF683Q8IZ20 524 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 PSMB7Q99436 277 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 C2orf49Q9BVC5 232 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-206ENST00000423161 LHX6Q9UPM6 363 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 HS3ST2Q9Y278 367 aa18.96■□□□□ 0.63
SREBF1-206ENST00000423161 TLR4O00206 839 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 SNAP91O60641 907 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 EPHA8P29322 1005 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-206ENST00000423161 NUDT1P36639 197 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 ARRB1P49407 418 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-206ENST00000423161 SLC25A52Q3SY17 297 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 DHRS13Q6UX07 377 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 LRRC31Q6UY01 552 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 TRIM69Q86WT6 500 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 MARCH9Q86YJ5 346 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 MFSD2AQ8NA29 543 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 ATP11CQ8NB49 1132 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 SAP25Q8TEE9 199 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 CCDC114Q96M63 670 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 NUP62CLQ9H1M0 184 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 ARHGAP20Q9P2F6 1191 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 VPS51Q9UID3 782 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 DMTF1Q9Y222 760 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 FARP1Q9Y4F1 1045 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-206ENST00000423161 NBEAQ8NFP9 2946 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 TRPM6Q9BX84 2022 aa18.95■□□□□ 0.62
SREBF1-206ENST00000423161 CHD5Q8TDI0 1954 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 FAM149AA5PLN7 773 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 GOLGA8SH3BPF8 625 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 ENC1O14682 589 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 LDOC1O95751 146 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-206ENST00000423161 LSM8O95777 96 aaKnown RBP18.94■□□□□ 0.62
SREBF1-206ENST00000423161 MT-CO1P00395 513 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 UCHL3P15374 230 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 FLT3P36888 993 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 C2CD6Q53TS8 623 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 TFAP2DQ7Z6R9 452 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 SETD3Q86TU7 594 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-206ENST00000423161 NOP9Q86U38 636 aaKnown RBP18.94■□□□□ 0.62
SREBF1-206ENST00000423161 OXR1Q8N573 874 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 DCAF4L2Q8NA75 395 aa18.94■□□□□ 0.62
SREBF1-206ENST00000423161 MSANTD4Q8NCY6 345 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms