RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NBL1P41271 181 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 MAGEA9P43362 315 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 MARCKSL1P49006 195 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ECT2LQ008S8 904 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 FOXK2Q01167 660 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF234Q14588 700 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 POLD3Q15054 466 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 LLGL1Q15334 1064 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 PTPRNQ16849 979 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ODF2Q5BJF6 829 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ANKRD20A8PQ5CZ79 823 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 IL31Q6EBC2 164 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF783Q6ZMS7 281 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 PEX26Q7Z412 305 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 NT5DC3Q86UY8 548 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 REXO1L1PQ8IX06 675 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SYCE1Q8N0S2 351 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 UMODL1-AS1Q8N2C9 162 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SPEM1Q8N4L4 309 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 DTWD2Q8NBA8 298 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 TXNDC5Q8NBS9 432 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 PCDH19Q8TAB3 1148 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ARHGEF2Q92974 986 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ERLEC1Q96DZ1 483 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 HMCESQ96FZ2 354 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 CELF6Q96J87 481 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 RPL10LQ96L21 214 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SLC39A8Q9C0K1 460 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 KLC2Q9H0B6 622 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 MAGEH1Q9H213 219 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ATP13A1Q9HD20 1204 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 CACNA2D2Q9NY47 1150 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 DDX56Q9NY93 547 aaKnown RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 RCOR3Q9P2K3 495 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 THAP10Q9P2Z0 257 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SLCO3A1Q9UIG8 710 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 AMFRQ9UKV5 643 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDGFC-202ENST00000422544 PCDHA3Q9Y5H8 950 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 STON1Q9Y6Q2 735 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 LAMA1P25391 3075 aa9.5□□□□□ -0.89
PDGFC-202ENST00000422544 RASA4BC9J798 803 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 CBX4O00257 560 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ZSCAN12O43309 604 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 RASA4O43374 803 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ZRANB2O95218 330 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 MT-CO1P00395 513 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ASLP04424 464 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 CTNNA2P26232 953 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 NTSR1P30989 418 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 CTNNA1P35221 906 aaKnown RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 IL12RB1P42701 662 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 CXCL12P48061 93 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 STK19P49842 368 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 PEX5P50542 639 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 NDST2P52849 883 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 YBEYP58557 167 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 SATB1Q01826 763 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 SULT2A1Q06520 285 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 HSF5Q4G112 596 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 EOGTQ5NDL2 527 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 AFMIDQ63HM1 303 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 SDE2Q6IQ49 451 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 MFSD7Q6UXD7 560 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 SERPINA13PQ6UXR4 307 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 LINGO4Q6UY18 593 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 LEKR1Q6ZMV7 388 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 SYT13Q7L8C5 426 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 TRMT11Q7Z4G4 463 aaKnown RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF354CQ86Y25 554 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 C1orf210Q8IVY1 113 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 TP53INP2Q8IXH6 220 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 KATNAL2Q8IYT4 538 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 RCOR2Q8IZ40 523 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 NPWQ8N729 165 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 PQLC3Q8N755 202 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 DCAF4L2Q8NA75 395 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ATOH1Q92858 354 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 FAF2Q96CS3 445 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 MRGPRX3Q96LB0 322 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 RNF157Q96PX1 679 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ZNF670Q9BS34 389 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 C2orf49Q9BVC5 232 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 MAK16Q9BXY0 300 aaKnown RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 ACE2Q9BYF1 805 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 LRRC19Q9H756 370 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 DONSONQ9NYP3 566 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 VPS51Q9UID3 782 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 MMP17Q9ULZ9 603 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 PACSIN2Q9UNF0 486 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 RAD54BQ9Y620 910 aa9.49□□□□□ -0.89
PDGFC-202ENST00000422544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDGFC-202ENST00000422544 USP27XA6NNY8 438 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 TTC34A8MYJ7 566 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 K7ERQ8 282 aa9.48□□□□□ -0.89
PDGFC-202ENST00000422544 DFFAO00273 331 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms