RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 NCAM2O15394 837 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 BDNFP23560 247 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 RETSATQ6NUM9 610 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 METTL16Q86W50 562 aaKnown RBP13.76□□□□□ -0.21
COL20A1-203ENST00000422202 ARMC8Q8IUR7 673 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 PDHXO00330 501 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 ENTPD3O75355 529 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 ALAS2P22557 587 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 PON1P27169 355 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 S100A3P33764 101 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 STYK1Q6J9G0 422 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 RASGRP2Q7LDG7 609 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 STK32CQ86UX6 486 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 RIT2Q99578 217 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 FAM126AQ9BYI3 521 aaPredicted RBP13.76□□□□□ -0.21
COL20A1-203ENST00000422202 XPNPEP3Q9NQH7 507 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 WHRNQ9P202 907 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 MAGEB16A2A368 324 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 NTRK1P04629 796 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 CES1P23141 567 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL20A1-203ENST00000422202 MTA1Q13330 715 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 MPPE1Q53F39 396 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 ACTRT2Q8TDY3 377 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 QRFPRQ96P65 431 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 SLC38A2Q96QD8 506 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 TRIM39Q9HCM9 518 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 ITGA11Q9UKX5 1188 aa13.76□□□□□ -0.21
COL20A1-203ENST00000422202 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CXCL8P10145 99 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CALB2P22676 271 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 RPA1P27694 616 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 HTR1BP28222 390 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CRABP2P29373 138 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 KCNMA1Q12791 1236 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CRY1Q16526 586 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 MTDHQ86UE4 582 aaKnown RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 RP9Q8TA86 221 aaKnown RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 IDI2Q9BXS1 227 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 DMGDHQ9UI17 866 aaKnown RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 SCAMP3O14828 347 aaKnown RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 GIMD1P0DJR0 217 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 NR2F1P10589 423 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 SERPINA4P29622 427 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 NR1I3Q14994 352 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 KLHDC7AQ5VTJ3 777 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 RUSC1Q9BVN2 902 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 KDM6BO15054 1643 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CCNA2P20248 432 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 ELAVL2Q12926 359 aaKnown RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 XRRA1Q6P2D8 792 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 TTC37Q6PGP7 1564 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 TP73O15350 636 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 PSIP1O75475 530 aaKnown RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 ACADSP16219 412 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 SCUBE3Q8IX30 993 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 NMRAL1Q9HBL8 299 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 GULP1Q9UBP9 304 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 ARHGAP31Q2M1Z3 1444 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 MGAT1P26572 445 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 BUD31P41223 144 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 EML3Q32P44 896 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 C18orf25Q96B23 403 aaPredicted RBP13.75□□□□□ -0.21
COL20A1-203ENST00000422202 ISCUQ9H1K1 167 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 GNPTGQ9UJJ9 305 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 PGM3O95394 542 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 BMP7P18075 431 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 MZT2BQ6NZ67 158 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 NEK5Q6P3R8 708 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 ERO1BQ86YB8 467 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 ZDHHC13Q8IUH4 622 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 KBTBD7Q8WVZ9 684 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 TEKT5Q96M29 485 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 NAT9Q9BTE0 207 aa13.75□□□□□ -0.21
COL20A1-203ENST00000422202 PHGDHO43175 533 aaKnown RBP13.74□□□□□ -0.21
COL20A1-203ENST00000422202 TMEM253P0C7T8 217 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 UGT1A5P35504 534 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 JMJD4Q9H9V9 463 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 TAGLN3Q9UI15 199 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 ISM1B1AKI9 464 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 SNRPD1P62314 119 aaKnown RBP13.74□□□□□ -0.21
COL20A1-203ENST00000422202 TRAP1Q12931 704 aaKnown RBP13.74□□□□□ -0.21
COL20A1-203ENST00000422202 ZNF846Q147U1 533 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 EMC1Q8N766 993 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 NUAK2Q9H093 628 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 PTGFRNQ9P2B2 879 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 ADRM1Q16186 407 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 PLA2G4EQ3MJ16 856 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 HHIPL2Q6UWX4 724 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 SERPINA13PQ6UXR4 307 aa13.74□□□□□ -0.21
COL20A1-203ENST00000422202 EHD3Q9NZN3 535 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms