RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 APOC2P02655 101 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 ASLP04424 464 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 CHRNB1P11230 501 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 MX2P20592 715 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 GLDCP23378 1020 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 ECT2LQ008S8 904 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 GALNT2Q10471 571 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 DGKKQ5KSL6 1271 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 SYT10Q6XYQ8 523 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 CCDC33Q8N5R6 958 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 ZNF513Q8N8E2 541 aaPredicted RBP17.93■□□□□ 0.46
LINC00271-201ENST00000421378 FLCNQ8NFG4 579 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 CYB5D2Q8WUJ1 264 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 HAUS1Q96CS2 278 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 PBKQ96KB5 322 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 COL25A1Q9BXS0 654 aaPredicted RBP17.93■□□□□ 0.46
LINC00271-201ENST00000421378 OSBPL6Q9BZF3 934 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 RBM12Q9NTZ6 932 aaKnown RBP17.93■□□□□ 0.46
LINC00271-201ENST00000421378 SAE1Q9UBE0 346 aaPredicted RBP17.93■□□□□ 0.46
LINC00271-201ENST00000421378 PLA2G4CQ9UP65 541 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 RAD54BQ9Y620 910 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 NYNRINQ9P2P1 1898 aaKnown RBP17.93■□□□□ 0.46
LINC00271-201ENST00000421378 TECTAO75443 2155 aa17.93■□□□□ 0.46
LINC00271-201ENST00000421378 TMEM221A6NGB7 291 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 M0R296 226 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 NCAM2O15394 837 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 KDELR3O43731 214 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 CEP104O60308 925 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 RNF40O75150 1001 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 PECAM1P16284 738 aaPredicted RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 TCP1P17987 556 aaKnown RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 GARSP41250 739 aaKnown RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 CTSOP43234 321 aaPredicted RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 KIR2DL1P43626 348 aaPredicted RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 ARF5P84085 180 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 SLC10A2Q12908 348 aaPredicted RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 KLF1Q13351 362 aaPredicted RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 E2F5Q15329 346 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 PAPD7Q5XG87 772 aaKnown RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 RETSATQ6NUM9 610 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 NPNTQ6UXI9 565 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 BZW1Q7L1Q6 419 aaKnown RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 SLC13A5Q86YT5 568 aaPredicted RBP17.92■□□□□ 0.46
LINC00271-201ENST00000421378 LRRC49Q8IUZ0 686 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 SYNPOQ8N3V7 929 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 KCNV2Q8TDN2 545 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 SP110Q9HB58 689 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 SLC25A13Q9UJS0 675 aa17.92■□□□□ 0.46
LINC00271-201ENST00000421378 ZSCAN5CA6NGD5 496 aaPredicted RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ZMPSTE24O75844 475 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 PDGFBP01127 241 aaPredicted RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 CASQ1P31415 396 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 TIE1P35590 1138 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 GEMIN4P57678 1058 aaKnown RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 PTPRNQ16849 979 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 C2orf27AQ580R0 203 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 EMC10Q5UCC4 262 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 EGFLAMQ63HQ2 1017 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 LINGO4Q6UY18 593 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ARHGAP36Q6ZRI8 547 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 CCDC105Q8IYK2 499 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 COG1Q8WTW3 980 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 RPL10LQ96L21 214 aaKnown RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 LMAN1LQ9HAT1 526 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 IPO11Q9UI26 975 aaKnown RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ERVW-1Q9UQF0 538 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 SIT1Q9Y3P8 196 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 MUC22E2RYF6 1773 aaPredicted RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 CXorf51AA0A1B0GTR3 108 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ANTXRLA6NF34 631 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 CES2O00748 559 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 PPP1R12AO14974 1030 aaPredicted RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 NPC1O15118 1278 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 FGGP02679 453 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 SRPRAP08240 638 aaKnown RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 HNRNPLP14866 589 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 PRLRP16471 622 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 NNMTP40261 264 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 STK19P49842 368 aaPredicted RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ST8SIA6P61647 398 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 MRPS21P82921 87 aaKnown RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ZNF234Q14588 700 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 PDK1Q15118 436 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 CWF19L1Q69YN2 538 aaKnown RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 CHPFQ8IZ52 775 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 HDAC11Q96DB2 347 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 ZDHHC4Q9NPG8 344 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 THAP10Q9P2Z0 257 aaPredicted RBP17.91■□□□□ 0.46
LINC00271-201ENST00000421378 HCN2Q9UL51 889 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 HS3ST2Q9Y278 367 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 SAR1BQ9Y6B6 198 aa17.91■□□□□ 0.46
LINC00271-201ENST00000421378 TCRBV7S2A1N4TA0A589 114 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 J3KR12 359 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 KIF2AO00139 706 aaPredicted RBP17.9■□□□□ 0.46
LINC00271-201ENST00000421378 MAFKO60675 156 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 PRAMEF11O60813 436 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 TUBB4AP04350 444 aa17.9■□□□□ 0.46
LINC00271-201ENST00000421378 CHRM1P11229 460 aaPredicted RBP17.9■□□□□ 0.46
LINC00271-201ENST00000421378 SERPINH1P50454 418 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms