RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 C14orf80Q86SX3 495 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PRPF39Q86UA1 669 aaKnown RBP17.83■□□□□ 0.44
MSH6-203ENST00000420813 TBC1D3Q8IZP1 549 aaPredicted RBP17.83■□□□□ 0.44
MSH6-203ENST00000420813 OXR1Q8N573 874 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 TKTL2Q9H0I9 626 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PDCL3Q9H2J4 239 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 ERVMER34-1Q9H9K5 563 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PLCB1Q9NQ66 1216 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 CHMP5Q9NZZ3 219 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 DKK4Q9UBT3 224 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 PPM1HQ9ULR3 514 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 DMTF1Q9Y222 760 aa17.83■□□□□ 0.44
MSH6-203ENST00000420813 GOLGA8CPA6NN73 597 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 WNT9AO14904 365 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 ADCY5O95622 1261 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 CYP11B1P15538 503 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 ARRB1P49407 418 aaPredicted RBP17.82■□□□□ 0.44
MSH6-203ENST00000420813 SULT1E1P49888 294 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 METAP1P53582 386 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 NXPH1P58417 271 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 KRT83P78385 493 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 RAPGEF1Q13905 1077 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 DRAP1Q14919 205 aaPredicted RBP17.82■□□□□ 0.44
MSH6-203ENST00000420813 SHBQ15464 509 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 DPCR1Q3MIW9 517 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 SLC25A52Q3SY17 297 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 AGBL4Q5VU57 503 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 Q6ZVU0 165 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 SETD3Q86TU7 594 aaPredicted RBP17.82■□□□□ 0.44
MSH6-203ENST00000420813 IQCHQ86VS3 1027 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 TRIM69Q86WT6 500 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 ZNF683Q8IZ20 524 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 MFSD2AQ8NA29 543 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 PIP4K2CQ8TBX8 421 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 SAP25Q8TEE9 199 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 C18orf8Q96DM3 657 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 C1orf74Q96LT6 269 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 C2orf49Q9BVC5 232 aaPredicted RBP17.82■□□□□ 0.44
MSH6-203ENST00000420813 SIK2Q9H0K1 926 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 MUC3BQ9H195 1237 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 ARHGAP20Q9P2F6 1191 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 SARDHQ9UL12 918 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 PCDHGA1Q9Y5H4 931 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 FHOD1Q9Y613 1164 aa17.82■□□□□ 0.44
MSH6-203ENST00000420813 TRPM6Q9BX84 2022 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 URB1O60287 2271 aaKnown RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 MYLKQ15746 1914 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 TLR4O00206 839 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 MAGEC1O60732 1142 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 RTN2O75298 545 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 CNTN5O94779 1100 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 LSM8O95777 96 aaKnown RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 ITGAVP06756 1048 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 RHOCP08134 193 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 EPHA8P29322 1005 aaPredicted RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 RXRGP48443 463 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 RNASE9P60153 205 aaKnown RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 DEUP1Q05D60 604 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 KCNMA1Q12791 1236 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 CNTN1Q12860 1018 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 OVGP1Q12889 678 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 SMAD1Q15797 465 aaKnown RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 ALFQ53S48 1182 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 CT47A1Q5JQC4 288 aaPredicted RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 FAM102AQ5T9C2 384 aaPredicted RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 KLHDC7AQ5VTJ3 777 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 ERICH1Q86X53 443 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 GATAD2AQ86YP4 633 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 CCDC114Q96M63 670 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 NAA15Q9BXJ9 866 aaKnown RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 PREBQ9HCU5 417 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 ANLNQ9NQW6 1124 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 LHX6Q9UPM6 363 aa17.81■□□□□ 0.44
MSH6-203ENST00000420813 FARP1Q9Y4F1 1045 aaPredicted RBP17.81■□□□□ 0.44
MSH6-203ENST00000420813 TDRD6O60522 2096 aaKnown RBP17.8■□□□□ 0.44
MSH6-203ENST00000420813 IGLV3-10A0A075B6K4 115 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 DRGXA6NNA5 263 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 I6L893 689 aaPredicted RBP17.8■□□□□ 0.44
MSH6-203ENST00000420813 PLK4O00444 970 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 CDK4P11802 303 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 SRCP12931 536 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 UCHL3P15374 230 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 ZNF18P17022 549 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 TFE3P19532 575 aaPredicted RBP17.8■□□□□ 0.44
MSH6-203ENST00000420813 CLCN6P51797 869 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 PRAMEF14Q5SWL7 426 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 LRRC31Q6UY01 552 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 XYLT1Q86Y38 959 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 DCAF4L2Q8NA75 395 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 MSANTD4Q8NCY6 345 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 TBCBQ99426 244 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 PSMB7Q99436 277 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 VPS51Q9UID3 782 aa17.8■□□□□ 0.44
MSH6-203ENST00000420813 ITPR1Q14643 2758 aa17.79■□□□□ 0.44
MSH6-203ENST00000420813 NBEAQ8NFP9 2946 aa17.79■□□□□ 0.44
MSH6-203ENST00000420813 ENC1O14682 589 aa17.79■□□□□ 0.44
MSH6-203ENST00000420813 LDOC1O95751 146 aaPredicted RBP17.79■□□□□ 0.44
MSH6-203ENST00000420813 C1SP09871 688 aa17.79■□□□□ 0.44
MSH6-203ENST00000420813 EEF1GP26641 437 aaKnown RBP17.79■□□□□ 0.44
MSH6-203ENST00000420813 CCDC15Q0P6D6 951 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms