RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 METTL5Q9NRN9 209 aaKnown RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 TM7SF3Q9NS93 570 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 MPP6Q9NZW5 540 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 PCOLCE2Q9UKZ9 415 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 HS3ST2Q9Y278 367 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 NCKAP1Q9Y2A7 1128 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
SSBP3-206ENST00000420121 COL5A1P20908 1838 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-206ENST00000420121 A0A0D9SEW6 157 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 A0A1W2PPC4 97 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 LGALS16A8MUM7 142 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 E9PAM4 449 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 RNASEH1O60930 286 aaKnown RBP11.33□□□□□ -0.6
SSBP3-206ENST00000420121 GJB6O95452 261 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 CER1O95813 267 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 ADH1BP00325 375 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 IL1BP01584 269 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 CTSLP07711 333 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 SRCP12931 536 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 GOT1P17174 413 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 CCR5P51681 352 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 GSCP56915 257 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-206ENST00000420121 PPP2CBP62714 309 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 PPP2CAP67775 309 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 MYL5Q02045 173 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 TRIP6Q15654 476 aaKnown RBP11.33□□□□□ -0.6
SSBP3-206ENST00000420121 DLG2Q15700 870 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 STX1AQ16623 288 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 ZNF423Q2M1K9 1284 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 MANEALQ5VSG8 457 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 IL27RAQ6UWB1 636 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 Q6ZVU0 165 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 RAB44Q7Z6P3 723 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-206ENST00000420121 GLRX5Q86SX6 157 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 FAM131BQ86XD5 332 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 OR2T34Q8NGX1 318 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 SLC30A5Q8TAD4 765 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 SLC6A18Q96N87 628 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 OMDQ99983 421 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 MAGEB5Q9BZ81 275 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 ANO10Q9NW15 660 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 VPS28Q9UK41 221 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 KLK13Q9UKR3 277 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 NEU3Q9UQ49 428 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 BTBD3Q9Y2F9 522 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 DAAM1Q9Y4D1 1078 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 PCDHGB2Q9Y5G2 931 aa11.33□□□□□ -0.6
SSBP3-206ENST00000420121 FREM2Q5SZK8 3169 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 A0A1W2PR77 199 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 TCRBV5S1A1TA0A578 114 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 FAM221BA6H8Z2 402 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 C2CD4BA6NLJ0 364 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 H0Y8X5 98 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 K7ERQ8 282 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 KCNK3O14649 394 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 MCF2LO15068 1137 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 ALOX15BO15296 676 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 SMAD6O43541 496 aaKnown RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 LATO43561 262 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 ZNF821O75541 412 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 ZMPSTE24O75844 475 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 DKK1O94907 266 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 PROS1P07225 676 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 RHOCP08134 193 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 ATP1A3P13637 1013 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 GLDCP23378 1020 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 NNMTP40261 264 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 TAS2R38P59533 333 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 RACK1P63244 317 aaKnown RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 HNRNPDQ14103 355 aaKnown RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 CCDC14Q49A88 953 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 FKBP15Q5T1M5 1219 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 AGBL4Q5VU57 503 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 UNQ6494/PRO21346Q6UXR6 183 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 SND1Q7KZF4 910 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 SLCO6A1Q86UG4 719 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 OR7D4Q8NG98 312 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 OR2A12Q8NGT7 310 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 GANCQ8TET4 914 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 RXFP2Q8WXD0 754 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 CENPIQ92674 756 aaPredicted RBP11.32□□□□□ -0.6
SSBP3-206ENST00000420121 HAPLN3Q96S86 360 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 C11orf70Q9BRQ4 267 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 TOR4AQ9NXH8 423 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 ARHGAP20Q9P2F6 1191 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 SLC25A13Q9UJS0 675 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 NEUROG3Q9Y4Z2 214 aa11.32□□□□□ -0.6
SSBP3-206ENST00000420121 LRRC72A6NJI9 287 aa11.31□□□□□ -0.6
SSBP3-206ENST00000420121 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms