RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NACA2Q9H009 215 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 THAP9Q9H5L6 903 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 ECT2Q9H8V3 914 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 LMAN1LQ9HAT1 526 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 NMUR1Q9HB89 426 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 TLR8Q9NR97 1041 aaKnown RBP7.26□□□□□ -1.25
HMGN1-205ENST00000419378 RBM12Q9NTZ6 932 aaKnown RBP7.26□□□□□ -1.25
HMGN1-205ENST00000419378 OSER1Q9NX31 292 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 CFAP97Q9P2B7 532 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 TSPAN16Q9UKR8 245 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 PCDHB4Q9Y5E5 795 aa7.26□□□□□ -1.25
HMGN1-205ENST00000419378 BLACEA4D250 179 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 TULP2O00295 520 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 LAMTOR5O43504 91 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 NFATC1O95644 943 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 MBD3O95983 291 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 SCG5P05408 212 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 THBDP07204 575 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 PAEPP09466 180 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 SP9P0CG40 484 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 VDRP11473 427 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 ITGB7P26010 798 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 GJA4P35212 333 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 MTIF2P46199 727 aaKnown RBP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 ZNF132P52740 706 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 SLC8A3P57103 927 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 EGR3Q06889 387 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 BST2Q10589 180 aaKnown RBP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 MAP4K2Q12851 820 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 MAN2A1Q16706 1144 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 TPD52L1Q16890 204 aaPredicted RBP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 RAB41Q5JT25 222 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 DGKKQ5KSL6 1271 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 NAIF1Q69YI7 327 aaPredicted RBP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 FSTL4Q6MZW2 842 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 TRIM65Q6PJ69 517 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 LCLAT1Q6UWP7 414 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 RNF111Q6ZNA4 994 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 RBM43Q6ZSC3 357 aaKnown RBP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 SCD5Q86SK9 330 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 FAM114A1Q8IWE2 563 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 SYNPOQ8N3V7 929 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 UBA3Q8TBC4 463 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 TFAP2BQ92481 460 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 C1orf159Q96HA4 380 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 ZSWIM1Q9BR11 485 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 CRACR2AQ9BSW2 395 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 LINC00597Q9H2U6 94 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 PRMT8Q9NR22 394 aaPredicted RBP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 AP5S1Q9NUS5 200 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGN1-205ENST00000419378 HESX1Q9UBX0 185 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 FBXO4Q9UKT5 387 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 KIAA1257Q9ULG3 409 aa7.25□□□□□ -1.25
HMGN1-205ENST00000419378 FANCMQ8IYD8 2048 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 E2F8A0AVK6 867 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TMEM82A0PJX8 343 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 GTPBP10A4D1E9 387 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 ANKRD62A6NC57 917 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 PROB1E7EW31 1015 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 M0QYV0 167 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TRDMT1O14717 391 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SLC9A3R1O14745 358 aaPredicted RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 XPO1O14980 1071 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 MDM4O15151 490 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TBX18O95935 607 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CPP00450 1065 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CALCAP01258 141 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CYP17A1P05093 508 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SETSIPP0DME0 302 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 IRF1P10914 325 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 RARGP13631 454 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 KRT5P13647 590 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SLC9A1P19634 815 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 DRD1P21728 446 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 ATP5C1P36542 298 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SEPHS1P49903 392 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 MRE11P49959 708 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CCR3P51677 355 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TKTL1P51854 596 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 GYS2P54840 703 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 APBA1Q02410 837 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TEKQ02763 1124 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CSTF1Q05048 431 aaKnown RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 ADIGQ0VDE8 80 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 GRSF1Q12849 480 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 IKZF1Q13422 519 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 ZNF528Q3MIS6 628 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 HSP90AA4PQ58FG1 418 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TMEM196Q5HYL7 178 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 CT47A1Q5JQC4 288 aaPredicted RBP7.24□□□□□ -1.25
HMGN1-205ENST00000419378 SLC35F1Q5T1Q4 408 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 DENND5AQ6IQ26 1287 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 GJB7Q6PEY0 223 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 KLHDC10Q6PID8 442 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TSSK4Q6SA08 328 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 BHLHA9Q7RTU4 235 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 TADA2BQ86TJ2 420 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 BBS7Q8IWZ6 715 aa7.24□□□□□ -1.25
HMGN1-205ENST00000419378 ARHGAP18Q8N392 663 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms