RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PCDH9Q9HC56 1237 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 KLHL3Q9UH77 587 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CENPXA8MT69 81 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PTPN1P18031 435 aaKnown RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CALB2P22676 271 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 GPAT3Q53EU6 434 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 SLC44A4Q53GD3 710 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 NOMO2Q5JPE7 1267 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 N4BP2L1Q5TBK1 243 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 KRT73Q86Y46 540 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 DSELQ8IZU8 1212 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 FERD3LQ96RJ6 166 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 KLHL4Q9C0H6 718 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CCDC167Q9P0B6 97 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CACNA1FO60840 1977 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 GAKO14976 1311 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 A0A087X1B8 175 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 RARGP13631 454 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 MAPKAPK2P49137 400 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 SCNN1GP51170 649 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 USP41Q3LFD5 358 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 RAP1GAP2Q684P5 730 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 OR10G6Q8NH81 332 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 MLPHQ9BV36 600 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-205ENST00000418258 RIOX1Q9H6W3 641 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 OR10H1Q9Y4A9 318 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 PCDHA3Q9Y5H8 950 aa11.39□□□□□ -0.59
PTCH1-205ENST00000418258 GTPBP1O00178 669 aaKnown RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 CXCL14O95715 111 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 TRIQKQ629K1 86 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 CHPFQ8IZ52 775 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 NAT16Q8N8M0 369 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ZBTB45Q96K62 511 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 DIABLOQ9NR28 239 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ANXA5P08758 320 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 COX7A2P14406 83 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 FASP25445 335 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 MTDHQ86UE4 582 aaKnown RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 NSMCE2Q96MF7 247 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SH3GL2Q99962 352 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 TM6SF2Q9BZW4 377 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ENOPH1Q9UHY7 261 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SPATA2Q9UM82 520 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 CRATP43155 626 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 HNMTP50135 292 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 NDUFAF6Q330K2 333 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ZBTB49Q6ZSB9 765 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 LRRC34Q8IZ02 419 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 KIFC1Q9BW19 673 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SUCOQ9UBS9 1254 aaKnown RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 STON1Q9Y6Q2 735 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 URADA6NGE7 173 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 HACD1B0YJ81 288 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 E5RJQ4 531 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 CHKAP35790 457 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 PIK3CGP48736 1102 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ELL3Q9HB65 397 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 A0A0B4J269 797 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 PIK3R1P27986 724 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 SHMT1P34896 483 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 PEX6Q13608 980 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ULBP1Q9BZM6 244 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 FGF10O15520 208 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 TMED10P49755 219 aaKnown RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 RGS1Q08116 209 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 TCHHL1Q5QJ38 904 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-205ENST00000418258 ACTRT1Q8TDG2 376 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 MYOCQ99972 504 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 KBTBD4Q9NVX7 518 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 NWD1Q149M9 1564 aa11.38□□□□□ -0.59
PTCH1-205ENST00000418258 CHD4Q14839 1912 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 FAM86B1E9PN63 330 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 VPS4BO75351 444 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 ADH1CP00326 375 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 HMGCRP04035 888 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 FAM86B2P0C5J1 330 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 NPR3P17342 541 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 MTAPQ13126 283 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 DDI2Q5TDH0 399 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 ZPBP2Q6X784 338 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 DEFB107AQ8IZN7 70 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 TERB1Q8NA31 727 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 C10orf88Q9H8K7 445 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 TAGLN3Q9UI15 199 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 PSMB9P28065 219 aa11.37□□□□□ -0.59
PTCH1-205ENST00000418258 KPNB1Q14974 876 aaKnown RBP11.37□□□□□ -0.59
PTCH1-205ENST00000418258 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms