RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 LRIG3Q6UXM1 1119 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 PDIK1LQ8N165 341 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 CPXM2Q8N436 756 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 SMG7Q92540 1137 aaKnown RBP21.23■□□□□ 0.99
CASC3-203ENST00000418132 AGAP3Q96P47 875 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 SMG9Q9H0W8 520 aaKnown RBP21.23■□□□□ 0.99
CASC3-203ENST00000418132 GBA3Q9H227 469 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 SAYSD1Q9NPB0 183 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 EIF2B3Q9NR50 452 aaKnown RBP21.23■□□□□ 0.99
CASC3-203ENST00000418132 E7EVH7 732 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 TTC4O95801 387 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 NUDT17P0C025 328 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 C6orf118Q5T5N4 469 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 UBAP2Q5T6F2 1119 aaKnown RBP21.23■□□□□ 0.99
CASC3-203ENST00000418132 SETD3Q86TU7 594 aaPredicted RBP21.23■□□□□ 0.99
CASC3-203ENST00000418132 C12orf76Q8N812 135 aaPredicted RBP21.23■□□□□ 0.99
CASC3-203ENST00000418132 SH3RF2Q8TEC5 729 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 SERPINB12Q96P63 405 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 SH3GL2Q99962 352 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 SFXN1Q9H9B4 322 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 PIDD1Q9HB75 910 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 NINJ2Q9NZG7 142 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 TBC1D30Q9Y2I9 924 aa21.23■□□□□ 0.99
CASC3-203ENST00000418132 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 CDH23Q9H251 3354 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 E2F8A0AVK6 867 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 GNA12Q03113 381 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 PDIA2Q13087 525 aaKnown RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 ZNF177Q13360 481 aaPredicted RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 HNRNPDQ14103 355 aaKnown RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 SLC29A2Q14542 456 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 MSS51Q4VC12 460 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 DENND2CQ68D51 928 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 BBS7Q8IWZ6 715 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 HJURPQ8NCD3 748 aaPredicted RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 OR52K2Q8NGK3 314 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 ARHGEF2Q92974 986 aaKnown RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 PPP2R3CQ969Q6 453 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 ZNF419Q96HQ0 510 aaPredicted RBP21.22■□□□□ 0.99
CASC3-203ENST00000418132 GORASP1Q9BQQ3 440 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 TDP1Q9NUW8 608 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 DZANK1Q9NVP4 752 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 RSPH14Q9UHP6 348 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 CCL26Q9Y258 94 aa21.22■□□□□ 0.99
CASC3-203ENST00000418132 ILVBLA1L0T0 632 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 J3KR12 359 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 CACNG3O60359 315 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 ACVRL1P37023 503 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 IL10RBQ08334 325 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 KYNUQ16719 465 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 CAND1Q86VP6 1230 aaKnown RBP21.21■□□□□ 0.99
CASC3-203ENST00000418132 USP13Q92995 863 aaPredicted RBP21.21■□□□□ 0.99
CASC3-203ENST00000418132 TMA16Q96EY4 203 aaKnown RBP21.21■□□□□ 0.99
CASC3-203ENST00000418132 NFKB1P19838 968 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 FASTKD3Q14CZ7 662 aaKnown RBP21.21■□□□□ 0.99
CASC3-203ENST00000418132 TMC5Q6UXY8 1006 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 ZNF534Q76KX8 674 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 PDCD7Q8N8D1 485 aaKnown RBP21.21■□□□□ 0.99
CASC3-203ENST00000418132 USP33Q8TEY7 942 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 C9orf72Q96LT7 481 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 RUFY1Q96T51 708 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 SP110Q9HB58 689 aa21.21■□□□□ 0.99
CASC3-203ENST00000418132 MRPS23Q9Y3D9 190 aaKnown RBP21.21■□□□□ 0.99
CASC3-203ENST00000418132 TNRC18O15417 2968 aaPredicted RBP21.2■□□□□ 0.98
CASC3-203ENST00000418132 A0A0D9SEW6 157 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 TYW5A2RUC4 315 aaKnown RBP21.2■□□□□ 0.98
CASC3-203ENST00000418132 F5H423 210 aaPredicted RBP21.2■□□□□ 0.98
CASC3-203ENST00000418132 OPA1O60313 960 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 TBL1XO60907 577 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 CEBPBP17676 345 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 RENBPP51606 427 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 TNK2Q07912 1038 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 CXorf57Q6NSI4 855 aaKnown RBP21.2■□□□□ 0.98
CASC3-203ENST00000418132 POTEHQ6S545 545 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 KLHDC8BQ8IXV7 354 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 ZBED8Q8IZ13 594 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 TTC16Q8NEE8 873 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 OR2W6PQ8NHA6 318 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 TTC25Q96NG3 672 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 RBM22Q9NW64 420 aaKnown RBP eCLIP21.2■□□□□ 0.98
CASC3-203ENST00000418132 PSD3Q9NYI0 1048 aa21.2■□□□□ 0.98
CASC3-203ENST00000418132 PRAMEF11O60813 436 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 PRAMEF12O95522 483 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 RHOCP08134 193 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 TCF3P15923 654 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 HOXD9P28356 352 aaPredicted RBP21.19■□□□□ 0.98
CASC3-203ENST00000418132 MAGEA3P43357 314 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 IFNAR2P48551 515 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 EIF3BP55884 814 aaKnown RBP21.19■□□□□ 0.98
CASC3-203ENST00000418132 TMEM184AQ6ZMB5 413 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 ZNF354CQ86Y25 554 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 TEX26Q8N6G2 289 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 GOLGA6L1Q8N7Z2 621 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 TDRD5Q8NAT2 981 aaKnown RBP21.19■□□□□ 0.98
CASC3-203ENST00000418132 RIN3Q8TB24 985 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 ITFG1Q8TB96 612 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 ZSWIM3Q96MP5 696 aa21.19■□□□□ 0.98
CASC3-203ENST00000418132 XAB2Q9HCS7 855 aaKnown RBP21.19■□□□□ 0.98
CASC3-203ENST00000418132 MYO9BQ13459 2157 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms