RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 TRIP4Q15650 581 aaPredicted RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 AASDHQ4L235 1098 aaPredicted RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 HECTD3Q5T447 861 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 IL31Q6EBC2 164 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 RWDD4Q6NW29 188 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 MTERF4Q7Z6M4 381 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 CDKL3Q8IVW4 592 aaPredicted RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 ATP6V0D2Q8N8Y2 350 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 EIF1ADQ8N9N8 165 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 BBOF1Q8ND07 529 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 AENQ8WTP8 325 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 LRRC45Q96CN5 670 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 OSBPL2Q9H1P3 480 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 ARHGEF38Q9NXL2 777 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 MTRF1LQ9UGC7 380 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 DNMT3LQ9UJW3 386 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 TLR6Q9Y2C9 796 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 SHROOM3Q8TF72 1996 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 CHD6Q8TD26 2715 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 MYO18AQ92614 2054 aaKnown RBP13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 OBSL1O75147 1896 aa13.53□□□□□ -0.24
HLA-DMB-258ENST00000418107 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.24
HLA-DMB-258ENST00000418107 ANAPC1Q9H1A4 1944 aa13.52□□□□□ -0.24
HLA-DMB-258ENST00000418107 FAM72CH0Y354 149 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 FOXD2O60548 495 aaPredicted RBP13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 MAP3K6O95382 1288 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 EPHB2P29323 1055 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 HOXA6P31267 233 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ATP5C1P36542 298 aaKnown RBP13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 HCAR3P49019 387 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 PXNP49023 591 aaPredicted RBP13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 CYP4F8P98187 520 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 GPS1Q13098 491 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ARHGAP15Q53QZ3 475 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM72AQ5TYM5 149 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM72DQ6L9T8 149 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 PKN3Q6P5Z2 889 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM72BQ86X60 149 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 SEC14L1Q92503 715 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 PSMG2Q969U7 264 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 FMO2Q99518 471 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ARRDC1-AS1Q9H2J1 176 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 CCSER2Q9H7U1 834 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 C10orf88Q9H8K7 445 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ANLNQ9NQW6 1124 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 WHRNQ9P202 907 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ANAPC5Q9UJX4 755 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 ASB3Q9Y575 518 aa13.52□□□□□ -0.25
HLA-DMB-258ENST00000418107 CFAP69A5D8W1 941 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 NDC80O14777 642 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 KCNN4O15554 427 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZDHHC11BP0C7U3 371 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ETS1P14921 441 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 HMGA1P17096 107 aaKnown RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ERCC2P18074 760 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ITIH2P19823 946 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 STIP1P31948 543 aaKnown RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 GGCXP38435 758 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 PPP3CCP48454 512 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 GBE1Q04446 702 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 NNTQ13423 1086 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 N4BP2L1Q5TBK1 243 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 NCBP2-AS2Q69YL0 99 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 LRRC31Q6UY01 552 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 PRUNE1Q86TP1 453 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 SYNPOQ8N3V7 929 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM71DQ8N9W8 422 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 BPIFB1Q8TDL5 484 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 TBC1D31Q96DN5 1066 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 TRMT2BQ96GJ1 504 aaKnown RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 FCRL2Q96LA5 508 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 SMG9Q9H0W8 520 aaKnown RBP13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 PCDH9Q9HC56 1237 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 OBP2AQ9NY56 170 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 CACNA1GO43497 2377 aa13.51□□□□□ -0.25
HLA-DMB-258ENST00000418107 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 RPP40O75818 363 aaKnown RBP13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 LRIG2O94898 1065 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 FGF19O95750 216 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 FAM153BP0C7A2 387 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 HTR7P34969 479 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 SERPINB6P35237 376 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 LIMK1P53667 647 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CAV1Q03135 178 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 XRCC4Q13426 336 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 DPYSQ14117 519 aa13.5□□□□□ -0.25
HLA-DMB-258ENST00000418107 CASP8Q14790 479 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms