RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TRIML1Q8N9V2 468 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TRIM58Q8NG06 486 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ZNF564Q8TBZ8 553 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 BPIFB1Q8TDL5 484 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TRPC4APQ8TEL6 797 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 USP33Q8TEY7 942 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CHFRQ96EP1 664 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MISP3Q96FF7 219 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 RUFY1Q96T51 708 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 NACAP1Q9BZK3 213 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 API5Q9BZZ5 524 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 SLC25A18Q9H1K4 315 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ZWILCHQ9H900 591 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 KIF9Q9HAQ2 790 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ARFGAP3Q9NP61 516 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ASAH2Q9NR71 780 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 OXSMQ9NWU1 459 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 IL20Q9NYY1 176 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MARCH2Q9P0N8 246 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 SLC9A2Q9UBY0 812 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 DNAI1Q9UI46 699 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CROTQ9UKG9 612 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TRHDEQ9UKU6 1024 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 TPCN1Q9ULQ1 816 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 MMP17Q9ULZ9 603 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 ITM2BQ9Y287 266 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 NAV3Q8IVL0 2385 aa5.78□□□□□ -1.48
ECHDC1-206ENST00000417628 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 PCSK5Q92824 1860 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ICE1Q9Y2F5 2266 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 TLN1Q9Y490 2541 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 TARSL2A2RTX5 802 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 CFAP69A5D8W1 941 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 NOTOA8MTQ0 251 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 C22orf46C9J442 243 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 EBAG9O00559 213 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 KDM1AO60341 852 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 TADA3O75528 432 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 CSDE1O75534 798 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FUCA1P04066 466 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 CD8BP10966 210 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 BDNFP23560 247 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ATICP31939 592 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SREBF1P36956 1147 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 CCT6AP40227 531 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 KIR2DL1P43626 348 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 KIR2DL2P43627 348 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 GALK1P51570 392 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ERVPABLB-1P60509 514 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ACTR2P61160 394 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 NSUN2Q08J23 767 aaKnown RBP eCLIP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 RUNX3Q13761 415 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 GPR19Q15760 415 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 NFE2Q16621 373 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 Q4G0T1 1027 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 DCAF6Q58WW2 860 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 CEP85LQ5SZL2 805 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SYCP2LQ5T4T6 812 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FAM160B1Q5W0V3 765 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 MCTP1Q6DN14 999 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FAAH2Q6GMR7 532 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 MIS18BP1Q6P0N0 1132 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ARHGAP36Q6ZRI8 547 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 B4GALNT4Q76KP1 1039 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 LUZP1Q86V48 1076 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SLC41A1Q8IVJ1 513 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SH3RF2Q8TEC5 729 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 HMGB4Q8WW32 186 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 P3H4Q92791 437 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 EXTL1Q92935 676 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SPDL1Q96EA4 605 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 TRMT2BQ96GJ1 504 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 C16orf45Q96MC5 204 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FAM20AQ96MK3 541 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 LRRC3BQ96PB8 259 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SMAD5Q99717 465 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 YIPF4Q9BSR8 244 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FUCA2Q9BTY2 467 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FUT8Q9BYC5 575 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 GCOM2Q9BZD3 368 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 NAPBQ9H115 298 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 VIPAS39Q9H9C1 493 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ACTR5Q9H9F9 607 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 JMJD4Q9H9V9 463 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 PCDH18Q9HCL0 1135 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 FBRSL1Q9HCM7 1045 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 UBN1Q9NPG3 1134 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 TBC1D7Q9P0N9 293 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 SLAMF8Q9P0V8 285 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 RABL2BQ9UNT1 228 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 ZNF148Q9UQR1 794 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 DAAM1Q9Y4D1 1078 aa5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 HELZP42694 1942 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-206ENST00000417628 KIAA1549LQ6ZVL6 1849 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 A0A1B0GTW7 788 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 GOLGA6L4A6NEF3 574 aa5.76□□□□□ -1.49
ECHDC1-206ENST00000417628 DVL2O14641 736 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms