RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TUBA3EQ6PEY2 450 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 MAMDC4Q6UXC1 1216 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 ZBTB49Q6ZSB9 765 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 POLNQ7Z5Q5 900 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 SLC22A16Q86VW1 577 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 HERC6Q8IVU3 1022 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 TPH2Q8IWU9 490 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 PGAM4Q8N0Y7 254 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 RNF148Q8N7C7 305 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 SNX31Q8N9S9 440 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
CCNT1-202ENST00000417344 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 GIMAP1Q8WWP7 306 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 S100ZQ8WXG8 99 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 APBB2Q92870 758 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 PEX13Q92968 403 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 USP13Q92995 863 aaPredicted RBP6.51□□□□□ -1.37
CCNT1-202ENST00000417344 SLC4A9Q96Q91 983 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 VPS35Q96QK1 796 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM47Q9BQJ4 181 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 CALN1Q9BXU9 219 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 EMILIN2Q9BXX0 1053 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 ATP13A3Q9H7F0 1226 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 VAT1LQ9HCJ6 419 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 C12orf4Q9NQ89 552 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 HOMER2Q9NSB8 354 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 PNPOQ9NVS9 261 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 SNTG2Q9NY99 539 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF229Q9UJW7 825 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 BCS1LQ9Y276 419 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 TESMINQ9Y4I5 508 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 SNX13Q9Y5W8 968 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 CICQ96RK0 1608 aaPredicted RBP6.51□□□□□ -1.37
CCNT1-202ENST00000417344 PSME4Q14997 1843 aa6.51□□□□□ -1.37
CCNT1-202ENST00000417344 SNTNA6NMZ2 147 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 TMEM229AB2RXF0 380 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 KBTBD13C9JR72 458 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 H7C0C1 242 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 hCG_1984214I3L0E3 225 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF195O14628 629 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SPINT1O43278 529 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 B4GALT4O60513 344 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CPNE6O95741 557 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NCAM1P13591 858 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NAGAP17050 411 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ATF7P17544 494 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ELK3P41970 407 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GPD2P43304 727 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SLC26A2P50443 739 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NME5P56597 212 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NLRP11P59045 1033 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PSMC6P62333 389 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NIPAL4Q0D2K0 466 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 DLG2Q15700 870 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CARTPTQ16568 116 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 C6orf10Q5SRN2 563 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CYP4A22Q5TCH4 519 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SLC9A4Q6AI14 798 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MRPL14Q6P1L8 145 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GADL1Q6ZQY3 521 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CATSPER3Q86XQ3 398 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ARMC8Q8IUR7 673 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CCDC28AQ8IWP9 274 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CTAGE3PQ8IX95 158 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NDUFAF2Q8N183 169 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PARP8Q8N3A8 854 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ZSWIM2Q8NEG5 633 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ZSCAN18Q8TBC5 510 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 BRSK1Q8TDC3 778 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 CELF1Q92879 486 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 NKD2Q969F2 451 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 TRIM63Q969Q1 353 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 PGBD4Q96DM1 585 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 C8orf48Q96LL4 319 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 AIFM2Q9BRQ8 373 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 BCAS3Q9H6U6 928 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SP140LQ9H930 580 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 AS3MTQ9HBK9 375 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MAGEE1Q9HCI5 957 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ZNF358Q9NW07 568 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 DMAC2Q9NW81 257 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SMOXQ9NWM0 555 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 STMN3Q9NZ72 180 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 XPO7Q9UIA9 1087 aaKnown RBP6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ENPP5Q9UJA9 477 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 TCAF1Q9Y4C2 921 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 RICTORQ6R327 1708 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 LAMB2P55268 1798 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 ADAMTSL3P82987 1691 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 A0A1W2PRU2 124 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 TCRBV7S3A2A0A539 114 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 RGSL1A5PLK6 1076 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 LRRIQ4A6NIV6 560 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GPR25O00155 361 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 MEIS1O00470 390 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 SOCS2O14508 198 aa6.5□□□□□ -1.37
CCNT1-202ENST00000417344 GRIN3BO60391 1043 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms