RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ISM2Q6H9L7 571 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 LVRNQ6Q4G3 990 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF793Q6ZN11 406 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ADPRHL1Q8NDY3 354 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZFPM2Q8WW38 1151 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 GOLGA1Q92805 767 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 MUL1Q969V5 352 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 PIMREGQ9BSJ6 248 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 TP63Q9H3D4 680 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 EPS8L2Q9H6S3 715 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 SFXN1Q9H9B4 322 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 ARFGAP3Q9NP61 516 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 DECR2Q9NUI1 292 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 C9orf78Q9NZ63 289 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 IGSF9Q9P2J2 1179 aa4.07□□□□□ -1.76
HMGB3P23-201ENST00000414981 DUOX2Q9NRD8 1548 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 SCAF11Q99590 1463 aaKnown RBP4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 CYP3A7-CYP3A51PA0A087WV96 503 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 A0A1W2PRQ8 180 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 PIP5K1BO14986 540 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 KAT7O95251 611 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 TGM2P21980 687 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 CYP3A7P24462 503 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 TSPAN7P41732 249 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 TECP42680 631 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 SLC37A1P57057 533 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 LINC00205P59089 165 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 WASHC5Q12768 1159 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 PTK2BQ14289 1009 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 DLGAP5Q15398 846 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF569Q5MCW4 686 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 HYIQ5T013 277 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 RINT1Q6NUQ1 792 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 TMEM88Q6PEY1 159 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZDHHC17Q8IUH5 632 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 HSCBQ8IWL3 235 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 SMAP1Q8IYB5 467 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 SAMD14Q8IZD0 417 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 ANKRD42Q8N9B4 389 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 EXD3Q8N9H8 876 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 OR52N4Q8NGI2 321 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 MSI2Q96DH6 328 aaKnown RBP4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 C18orf8Q96DM3 657 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 CENPOQ9BU64 300 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 ABHD14AQ9BUJ0 271 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 EBF3Q9H4W6 596 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 CXorf56Q9H5V9 222 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 ACAD8Q9UKU7 415 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 PCDHA12Q9UN75 941 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZBTB1Q9Y2K1 713 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 RABGAP1Q9Y3P9 1069 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 CDC42BPAQ5VT25 1732 aa4.06□□□□□ -1.76
HMGB3P23-201ENST00000414981 LMTK3Q96Q04 1460 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PRG4Q92954 1404 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 DISP3Q9P2K9 1392 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 SYNRGQ9UMZ2 1314 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 DPPA5A6NC42 116 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 C3orf70A6NLC5 250 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 H3BNX3 289 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 TRIM38O00635 465 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 FFAR2O15552 330 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 ATG13O75143 517 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 CNTN5O94779 1100 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 EPN2O95208 641 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 TOMM40O96008 361 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 CRYABP02511 175 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 RPN1P04843 607 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 TBXAS1P24557 533 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PPM1AP35813 382 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 HALP42357 657 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 HTR3AP46098 478 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 CDK7P50613 346 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 FOXL2P58012 376 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 RPL15P61313 204 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 RBM6P78332 1123 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 TRIM60Q495X7 471 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PIK3CD-AS1Q5SR53 167 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 ANO1Q5XXA6 986 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 RPAINQ86UA6 219 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 MORC1Q86VD1 984 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 CPXCR1Q8N123 301 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 CHCHD4Q8N4Q1 142 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PAQR4Q8N4S7 273 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PPHLN1Q8NEY8 458 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 SKA1Q96BD8 255 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 TBC1D20Q96BZ9 403 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 EID2BQ96D98 161 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 MCRS1Q96EZ8 462 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 REXO5Q96IC2 774 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 MPP4Q96JB8 637 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 CLMNQ96JQ2 1002 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZNF347Q96SE7 839 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 PRPF18Q99633 342 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 WDR83Q9BRX9 315 aaKnown RBP4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 WDR26Q9H7D7 661 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 FZD3Q9NPG1 666 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 THSD1Q9NS62 852 aa4.05□□□□□ -1.76
HMGB3P23-201ENST00000414981 ZBTB40Q9NUA8 1239 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms