RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 IDUAP35475 653 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 ACTN2P35609 894 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 KRT20P35900 424 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 GJC1P36383 396 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 TAP1Q03518 808 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 CUL4AQ13619 759 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 ENOSF1Q7L5Y1 443 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 GRASPQ7Z6J2 395 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 RFX6Q8HWS3 928 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 ULK2Q8IYT8 1036 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 C1orf131Q8NDD1 294 aaKnown RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 SETD9Q8NE22 299 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 DNAAF1Q8NEP3 725 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 SNRNP27Q8WVK2 155 aaKnown RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 IP6K1Q92551 441 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 KLHL29Q96CT2 875 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF764Q96H86 408 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 HEMGNQ9BXL5 484 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 PRKRIP1Q9H875 184 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 SMYD2Q9NRG4 433 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 ANKEF1Q9NU02 776 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMEM248Q9NWD8 314 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 GAR1Q9NY12 217 aaKnown RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 MPP6Q9NZW5 540 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 CORO1CQ9ULV4 474 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 DHDHQ9UQ10 334 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 DTX4Q9Y2E6 619 aa5.14□□□□□ -1.59
HMGB3P31-201ENST00000413333 hCG_1807616A0A1W2PRN6 198 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 B4DLN1 442 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 BTBD19C9JJ37 291 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 PTGES3LE9PB15 166 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 SMIM22K7EJ46 135 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 CCNDBP1O95273 360 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 MLYCDO95822 493 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 FCGR2AP12318 317 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 LAMP2P13473 410 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 AKR1A1P14550 325 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 ICAM3P32942 547 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 HOXD13P35453 343 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 ARL1P40616 181 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 SIM1P81133 766 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZBTB16Q05516 673 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 EFEMP1Q12805 493 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 MED22Q15528 200 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 SPATS1Q496A3 300 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 AKNAD1Q5T1N1 836 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 MFSD4BQ5TF39 518 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 HECTD2Q5U5R9 776 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMEM81Q6P7N7 255 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 RTL10Q7L3V2 364 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 TFAP2DQ7Z6R9 452 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 UEVLDQ8IX04 471 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 TTC39CQ8N584 583 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 SCAIQ8N9R8 606 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 SYNCQ9H7C4 482 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 CPNE5Q9HCH3 593 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 RAPGEFL1Q9UHV5 662 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 ZNF215Q9UL58 517 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 TTLL3Q9Y4R7 772 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 EMSYQ7Z589 1322 aa5.13□□□□□ -1.59
HMGB3P31-201ENST00000413333 GRID2IPA4D2P6 1211 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 OR6C68A6NDL8 312 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 PABPN1LA6NDY0 278 aaKnown RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 NPIPB8E9PQR5 432 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 H7C1Q1 480 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 SNAP23O00161 211 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 MGST3O14880 152 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 HNRNPCL1O60812 293 aaKnown RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 TACC1O75410 805 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 JTBO76095 146 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 STARD3NLO95772 234 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 GALTP07902 379 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 ST6GAL1P15907 406 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 HADHAP40939 763 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 SKIV2L2P42285 1042 aaKnown RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 RARRES1P49788 294 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 EIF3BP55884 814 aaKnown RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 RPL7AP62424 266 aaKnown RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMEM115Q12893 351 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 MTA1Q13330 715 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 PUM1Q14671 1186 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 WTAPQ15007 396 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 AADACL2Q6P093 401 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMCO3Q6UWJ1 677 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 GALNT5Q7Z7M9 940 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 AMIGO2Q86SJ2 522 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 KLBQ86Z14 1044 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 TMEM217Q8N7C4 229 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 EXD3Q8N9H8 876 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 PIGKQ92643 395 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 PERPQ96FX8 193 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 BBC3Q96PG8 261 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 Q9N2J8 555 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 BABAM1Q9NWV8 329 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 LIMA1Q9UHB6 759 aaKnown RBP5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 SLC8A2Q9UPR5 921 aa5.12□□□□□ -1.59
HMGB3P31-201ENST00000413333 TNFSF13BQ9Y275 285 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms