RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 TMBIM6P55061 237 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 PTENP60484 403 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 PPP1R15BQ5SWA1 713 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 ANKRD13AQ8IZ07 590 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 FNDC5Q8NAU1 212 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 RFKQ969G6 155 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 VMP1Q96GC9 406 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 MED11Q9P086 117 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 GNPTGQ9UJJ9 305 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 INVSQ9Y283 1065 aa7.5□□□□□ -1.21
PTPN3-203ENST00000412145 RAG1P15918 1043 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 DSG3P32926 999 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RPL14P50914 215 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 EPHB3P54753 998 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PLET1Q6UQ28 207 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 GSDMCQ9BYG8 508 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 IL22Q9GZX6 179 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ENTPD7Q9NQZ7 604 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TLR8Q9NR97 1041 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 HAO1Q9UJM8 370 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 VPS4AQ9UN37 437 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PLA2R1Q13018 1463 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 MATN2O00339 956 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ENTPD5O75356 428 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 IGSF6O95976 241 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TXNP10599 105 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 AKR1B1P15121 316 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 KLHL26Q53HC5 615 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 LCN1P1Q5VSP4 162 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 XKRXQ6PP77 449 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 OLFML1Q6UWY5 402 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ZNF554Q86TJ5 538 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 WDR49Q8IV35 697 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CCDC107Q8WV48 283 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 NELL1Q92832 810 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 SETD4Q9NVD3 440 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 MTF2Q9Y483 593 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PRDM15P57071 1507 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 INPP4BO15327 924 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 NR2C1P13056 603 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CHRNA5P30532 468 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ATXN7L2Q5T6C5 722 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PAMR1Q6UXH9 720 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 DNAAF5Q86Y56 855 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 REXO5Q96IC2 774 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 WRNIP1Q96S55 665 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 SEPT5Q99719 369 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CDH19Q9H159 772 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ZNF221Q9UK13 617 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 SAMD4AQ9UPU9 718 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PEX16Q9Y5Y5 336 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TGDSO95455 350 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 COX7A2P14406 83 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 AXLP30530 894 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ACSM2AQ08AH3 577 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 KCNMA1Q12791 1236 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PWP1Q13610 501 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 USP41Q3LFD5 358 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 FGD3Q5JSP0 725 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ACSM2BQ68CK6 577 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 NYAP1Q6ZVC0 841 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 NANOGNBQ7Z5D8 188 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RAB43Q86YS6 212 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ARMC8Q8IUR7 673 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PHF10Q8WUB8 498 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 PRMT6Q96LA8 375 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 MRPL9Q9BYD2 267 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 FAM126AQ9BYI3 521 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ROGDIQ9GZN7 287 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RNPEPL1Q9HAU8 725 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RABL2AQ9UBK7 228 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 OPTCQ9UBM4 332 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RABL2BQ9UNT1 228 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ZBTB14O43829 449 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 SLC25A12O75746 678 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ACADMP11310 421 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RPS12P25398 132 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ST3GAL1Q11201 340 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ZNF280DQ6N043 979 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 KLHL35Q6PF15 583 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 MFSD7Q6UXD7 560 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 KBTBD7Q8WVZ9 684 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CPA5Q8WXQ8 436 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TMEM169Q96HH4 297 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RNF145Q96MT1 663 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 FAM118BQ9BPY3 351 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 LMAN2LQ9H0V9 348 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 FAM124BQ9H5Z6 455 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 IL1RAPQ9NPH3 570 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 OGTO15294 1046 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CATP04040 527 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 ZCCHC18P0CG32 403 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 MNDAP41218 407 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CDK9P50750 372 aaKnown RBP7.49□□□□□ -1.21
PTPN3-203ENST00000412145 CACNB3P54284 484 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 RHOAP61586 193 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 S100A12P80511 92 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 LAYNQ6UX15 382 aa7.49□□□□□ -1.21
PTPN3-203ENST00000412145 TMEM192Q8IY95 271 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms