RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SYDE1Q6ZW31 735 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 USP50Q70EL3 339 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 GPR142Q7Z601 462 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KCNMB4Q86W47 210 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF34Q8IZ26 560 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 DEFB106AQ8N104 65 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 Q8N9G6 341 aaPredicted RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 FOSL2P15408 326 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CCNA2P20248 432 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 JAK1P23458 1154 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINH1P50454 418 aaKnown RBP8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KCTD8Q6ZWB6 473 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KIAA0319LQ8IZA0 1049 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KIF2CQ99661 725 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 ULBP1Q9BZM6 244 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 KIAA1257Q9ULG3 409 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 CDC42BPBQ9Y5S2 1711 aa8.54□□□□□ -1.04
SCN9A-203ENST00000409672 SH3D21A4FU49 640 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SNTNA6NMZ2 147 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 DDX3YO15523 660 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 TOP3BO95985 862 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 MYL12AP19105 171 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 BGNP21810 368 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 RRM1P23921 792 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 MAGEA10P43363 369 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 COPAP53621 1224 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 RGS1Q08116 209 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 DYNC1I2Q13409 638 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 C1DQ13901 141 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 C2orf27AQ580R0 203 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ZDHHC15Q96MV8 337 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SLITRK2Q9H156 845 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SNX12Q9UMY4 172 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ELFN1P0C7U0 828 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ERCC2P18074 760 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 FXR1P51114 621 aaKnown RBP eCLIP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 RENBPP51606 427 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PLGLB1Q02325 96 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 LRP8Q14114 963 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ZCCHC23Q6ZST2 131 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ANKS1BQ7Z6G8 1248 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 GPR135Q8IZ08 494 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 GAL3ST4Q96RP7 486 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 LDAHQ9H6V9 325 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 OGDHLQ9ULD0 1010 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 DUSP10Q9Y6W6 482 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 GLI2P10070 1586 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 A0A088AWK7 358 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 APODP05090 189 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF10P21506 573 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINB1P30740 379 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 NTSP30990 170 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 OR1D2P34982 312 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 TIE1P35590 1138 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 RABGGTBP53611 331 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PABPC1LQ4VXU2 614 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 HECTD3Q5T447 861 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 GPER1Q99527 375 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PTPN18Q99952 460 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 BARX2Q9UMQ3 279 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 TPBGLP0DKB5 382 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 CYP11B2P19099 503 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 XKR6Q5GH73 641 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 KLHDC7AQ5VTJ3 777 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ZDHHC20Q5W0Z9 365 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 CHERPQ8IWX8 916 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 CDYL2Q8N8U2 506 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 KAT2AQ92830 837 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SLC12A4Q9UP95 1085 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ARHGEF40Q8TER5 1519 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 A0A1W2PQ67 120 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 STBD1O95210 358 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 UQCRBP14927 111 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 CXCR2P25025 360 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ELAVL2Q12926 359 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PDPK2PQ6A1A2 396 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 RGMBQ6NW40 437 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SLC27A1Q6PCB7 646 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 TMED8Q6PL24 325 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 CYP2R1Q6VVX0 501 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 KCNK16Q96T55 309 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ITGA11Q9UKX5 1188 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PCDHB11Q9Y5F2 797 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 OR4Q2P0C623 313 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 FBXO33Q7Z6M2 555 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF248Q8NDW4 579 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINB12Q96P63 405 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 SH3GL2Q99962 352 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 OPTCQ9UBM4 332 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 MTF2Q9Y483 593 aaPredicted RBP8.53□□□□□ -1.04
SCN9A-203ENST00000409672 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF862O60290 1169 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms