RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 DCP2Q8IU60 420 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 RHPN2Q8IUC4 686 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 CADM3Q8N126 398 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 SLC15A4Q8N697 577 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 SPERTQ8NA61 448 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 ARRDC4Q8NCT1 418 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 GSDMBQ8TAX9 411 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 HELQQ8TDG4 1101 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 CCDC124Q96CT7 223 aaKnown RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 TXNDC15Q96J42 360 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 KLF6Q99612 283 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 BCL7BQ9BQE9 202 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 COPS7BQ9H9Q2 264 aaPredicted RBP10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 ARMC1Q9NVT9 282 aa10.83□□□□□ -0.68
NIF3L1-204ENST00000409357 KIAA1217Q5T5P2 1943 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 hCG_1818297A0A087WSY0 165 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 A0A1W2PQ45 241 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 A0A1W2PQY0 241 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 FAM172BPA6NC97 362 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 CLDN25C9JDP6 229 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 XPO1O14980 1071 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ACOX3O15254 700 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 AKAP10O43572 662 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TADA2AO75478 443 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 DNAJB5O75953 348 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 KRT75O95678 551 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 KRT6AP02538 564 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 KRT6BP04259 564 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 P4HBP07237 508 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ZSCAN5DPP0CG00 497 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 CCNA2P20248 432 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 GLDCP23378 1020 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ERFP50548 548 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TAS2R40P59535 323 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 BEX3Q00994 111 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 GCNT1Q02742 428 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 NSUN2Q08J23 767 aaKnown RBP eCLIP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ATP1A4Q13733 1029 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 PTK2BQ14289 1009 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SUZ12Q15022 739 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TAZQ16635 292 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TRIM60Q495X7 471 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TFDP3Q5H9I0 405 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 C6orf10Q5SRN2 563 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 C6orf183Q5T699 404 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 INTS11Q5TA45 600 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SIGIRRQ6IA17 410 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TAPT1Q6NXT6 567 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SLC39A5Q6ZMH5 540 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SPOCD1Q6ZMY3 1216 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 IGFN1Q86VF2 1251 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 HEATR4Q86WZ0 1026 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 LACC1Q8IV20 430 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 GOLM1Q8NBJ4 401 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 KLHDC9Q8NEP7 349 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 VMP1Q96GC9 406 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 FEM1CQ96JP0 617 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF512Q96ME7 567 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ZNF778Q96MU6 729 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TMEM79Q9BSE2 394 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 C20orf27Q9GZN8 174 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ADAMTS10Q9H324 1103 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 IFT122Q9HBG6 1241 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 HMG20AQ9NP66 347 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 ATP11BQ9Y2G3 1177 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 DNAJC16Q9Y2G8 782 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TBKBP1A7MCY6 615 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 NOTOA8MTQ0 251 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 GOLGA8MH3BSY2 632 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 HTRA2O43464 458 aaPredicted RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SCO2O43819 266 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 DUSP11O75319 330 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SORBS2O94875 1100 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 CHEK2O96017 543 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 GSRP00390 522 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 RALBP11234 206 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 BMP2P12643 396 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SMPD1P17405 629 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TGM1P22735 817 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SLC1A6P48664 564 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 MRPS22P82650 360 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SELENBP1Q13228 472 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 SNX17Q15036 470 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 KCNA10Q16322 511 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 FAM47CQ5HY64 1035 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 AARS2Q5JTZ9 985 aaKnown RBP10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 EPGNQ6UW88 154 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 POLNQ7Z5Q5 900 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 GALNT4Q8N4A0 578 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 MYCT1Q8N699 235 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 CNTD1Q8N815 330 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 RAB2BQ8WUD1 216 aa10.82□□□□□ -0.68
NIF3L1-204ENST00000409357 TTC9Q92623 222 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms