RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 SUN2Q9UH99 717 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 SLCO3A1Q9UIG8 710 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 HS3ST2Q9Y278 367 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 HYOU1Q9Y4L1 999 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 PCDHGA2Q9Y5H1 932 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 ALG6Q9Y672 507 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 SPAG17Q6Q759 2223 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 VPS13AQ96RL7 3174 aa20.78■□□□□ 0.92
PTCD3-202ENST00000409326 DMDP11532 3685 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 CBX4O00257 560 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 ZMPSTE24O75844 475 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 CD48P09326 243 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 GLDCP23378 1020 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 CAMK2GQ13555 558 aaPredicted RBP20.77■□□□□ 0.92
PTCD3-202ENST00000409326 DPYSL3Q14195 570 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 PDK2Q15119 407 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 HNRNPA1L2Q32P51 320 aaKnown RBP20.77■□□□□ 0.92
PTCD3-202ENST00000409326 PARP15Q460N3 678 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 RHOT1Q8IXI2 618 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 SH2D3CQ8N5H7 860 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 KCTD6Q8NC69 237 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 HMGB4Q8WW32 186 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 PDLIM2Q96JY6 352 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 ZNF670Q9BS34 389 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 GOLPH3Q9H4A6 298 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 LRRC19Q9H756 370 aa20.77■□□□□ 0.92
PTCD3-202ENST00000409326 USP34Q70CQ2 3546 aa20.77■□□□□ 0.91
PTCD3-202ENST00000409326 SHROOM3Q8TF72 1996 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 A0A0U1RQJ8 604 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 CXorf51AA0A1B0GTR3 108 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 TTC34A8MYJ7 566 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 RASA4BC9J798 803 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 DCLK1O15075 740 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 AXIN1O15169 862 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 RASA4O43374 803 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ATP9BO43861 1147 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 GABRG2P18507 467 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 IL4RP24394 825 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 NDST2P52849 883 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 NAP1L1P55209 391 aaKnown RBP20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ARF5P84085 180 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ZFYVE27Q5T4F4 411 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 RETSATQ6NUM9 610 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ZC3H14Q6PJT7 736 aaKnown RBP20.76■□□□□ 0.91
PTCD3-202ENST00000409326 DAAM2Q86T65 1068 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 MAP7D3Q8IWC1 876 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ATRIPQ8WXE1 791 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ATOH1Q92858 354 aaPredicted RBP20.76■□□□□ 0.91
PTCD3-202ENST00000409326 ERLEC1Q96DZ1 483 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 HMCESQ96FZ2 354 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 KLC2Q9H0B6 622 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 FBRSQ9HAH7 460 aa20.76■□□□□ 0.91
PTCD3-202ENST00000409326 BCCIPQ9P287 314 aaKnown RBP eCLIP20.76■□□□□ 0.91
PTCD3-202ENST00000409326 EDDM13A0A1B0GTR0 161 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 TARSL2A2RTX5 802 aaKnown RBP20.75■□□□□ 0.91
PTCD3-202ENST00000409326 ZBTB24O43167 697 aaPredicted RBP20.75■□□□□ 0.91
PTCD3-202ENST00000409326 PSTPIP1O43586 416 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 LILRB5O75023 590 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 MT-CO1P00395 513 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 SRCP12931 536 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 NDUFV2P19404 249 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 AMPD1P23109 780 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 CLCN6P51797 869 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 COPAP53621 1224 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 MMRN1Q13201 1228 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 AFMIDQ63HM1 303 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 LINGO4Q6UY18 593 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 LZTR1Q8N653 840 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 NPWQ8N729 165 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 OR2T3Q8NH03 318 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 FRS2Q8WU20 508 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 FAF2Q96CS3 445 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 MRGPRX1Q96LB2 322 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 CALN1Q9BXU9 219 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 PRSS16Q9NQE7 514 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 TRIM10Q9UDY6 481 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 HPCAL4Q9UM19 191 aa20.75■□□□□ 0.91
PTCD3-202ENST00000409326 KDELR3O43731 214 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 SIN3BO75182 1162 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 C7P10643 843 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 KDELR1P24390 212 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 SERPINH1P50454 418 aaKnown RBP20.74■□□□□ 0.91
PTCD3-202ENST00000409326 GEMIN4P57678 1058 aaKnown RBP20.74■□□□□ 0.91
PTCD3-202ENST00000409326 SLC20A2Q08357 652 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 SERINC3Q13530 473 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 IFI16Q16666 785 aaKnown RBP20.74■□□□□ 0.91
PTCD3-202ENST00000409326 TMCO3Q6UWJ1 677 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 VSIG1Q86XK7 387 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 ZNF354CQ86Y25 554 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 ARHGAP12Q8IWW6 846 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 PGBD3Q8N328 593 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 ATP11CQ8NB49 1132 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 RAPGEF5Q92565 580 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 PTPRN2Q92932 1015 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 CELF6Q96J87 481 aaKnown RBP20.74■□□□□ 0.91
PTCD3-202ENST00000409326 TPSD1Q9BZJ3 242 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 TSGA10Q9BZW7 698 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 SLC39A8Q9C0K1 460 aa20.74■□□□□ 0.91
PTCD3-202ENST00000409326 MKRN2Q9H000 416 aaKnown RBP20.74■□□□□ 0.91
PTCD3-202ENST00000409326 MTG2Q9H4K7 406 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms