RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NRG1Q02297 640 aaPredicted RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 OVGP1Q12889 678 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 DLG2Q15700 870 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 CDO1Q16878 200 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 CLEC16AQ2KHT3 1053 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 HLA-BQ31612 363 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 SETMARQ53H47 684 aaPredicted RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 DNAJC24Q6P3W2 148 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 NCEH1Q6PIU2 408 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 BNIPLQ7Z465 357 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 PRPF39Q86UA1 669 aaKnown RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 FAM131BQ86XD5 332 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 PHF13Q86YI8 300 aaPredicted RBP9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 OR14C36Q8NHC7 312 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 C1orf216Q8TAB5 229 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 FRS2Q8WU20 508 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 SLC20A1Q8WUM9 679 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 RXFP2Q8WXD0 754 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 NTAN1Q96AB6 310 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 ALG14Q96F25 216 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 CFAP57Q96MR6 1250 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 FAM129BQ96TA1 746 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 CEP44Q9C0F1 390 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 OSBPL2Q9H1P3 480 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 MTG2Q9H4K7 406 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 ATP13A1Q9HD20 1204 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 FSCN3Q9NQT6 498 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 AASDHPPTQ9NRN7 309 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 VPS51Q9UID3 782 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 HPCAL4Q9UM19 191 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 NEUROG3Q9Y4Z2 214 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 OR51B4Q9Y5P0 310 aa9.31□□□□□ -0.92
SNORD88A-201ENST00000408314 CEP295Q9C0D2 2601 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3DA0A087WVF3 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3IA0A087WXS9 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3EA0A087X179 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3KA0A087X1G2 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 A0A1B0GVT2 93 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3FA6NER0 549 aaPredicted RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ZSCAN5CA6NGD5 496 aaPredicted RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 C2CD4BA6NLJ0 364 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3LB9A6J9 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 GIPC1O14908 333 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 PLRG1O43660 514 aaKnown RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 RNGTTO60942 597 aaKnown RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 SRGAP2O75044 1071 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 CNTN5O94779 1100 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 IGHV4-34P06331 123 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3HP0C7X1 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 SRCP12931 536 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 GPD1P21695 349 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 CD38P28907 300 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 HTR7P34969 479 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ADRA1BP35368 520 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 GGCXP38435 758 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ARRB1P49407 418 aaPredicted RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 CSNK1EP49674 416 aaKnown RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 KLK7P49862 253 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TRIP6Q15654 476 aaKnown RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ST3GAL2Q16842 350 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ANO6Q4KMQ2 910 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 EFHC2Q5JST6 749 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3GQ6DHY5 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3CQ6IPX1 549 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 NAPEPLDQ6IQ20 393 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 NEK5Q6P3R8 708 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 C22orf39Q6P5X5 142 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 DCUN1D2Q6PH85 259 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 Q6ZVU0 165 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TFAP2DQ7Z6R9 452 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 C14orf80Q86SX3 495 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 GLRX5Q86SX6 157 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TRIM69Q86WT6 500 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ZNF683Q8IZ20 524 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D3Q8IZP1 549 aaPredicted RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 PCDH20Q8N6Y1 951 aaKnown RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TMIEQ8NEW7 156 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 PIP4K2CQ8TBX8 421 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 SETD7Q8WTS6 366 aaKnown RBP9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 FAM131CQ96AQ9 280 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 TBC1D31Q96DN5 1066 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 VCPIP1Q96JH7 1222 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 AGPAT1Q99943 283 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 PREBQ9HCU5 417 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 GDF3Q9NR23 364 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 OR12D3Q9UGF7 316 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 PPM1HQ9ULR3 514 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ANKRD6Q9Y2G4 727 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 EPG5Q9HCE0 2579 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 CHD8Q9HCK8 2581 aa9.3□□□□□ -0.92
SNORD88A-201ENST00000408314 ADAMTS9Q9P2N4 1935 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SPAARA0A1B0GVQ0 90 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 A0A1W2PQC6 194 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 SIGLEC16A6NMB1 481 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 EIF3CLB5ME19 914 aaKnown RBP9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 CBX4O00257 560 aa9.29□□□□□ -0.92
SNORD88A-201ENST00000408314 KPNA3O00505 521 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms