RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ANKRD6Q9Y2G4 727 aa19.8■□□□□ 0.76
SMARCB1-204ENST00000407422 IGLV3-10A0A075B6K4 115 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 LRRC72A6NJI9 287 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 C10orf142B7Z368 130 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 KCNK3O14649 394 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 UNGP13051 313 aaPredicted RBP19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 ATP1A3P13637 1013 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 GRIA4P48058 902 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 ADPRHP54922 357 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 TYRO3Q06418 890 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 PTP4A2Q12974 167 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 TEAD4Q15561 434 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 CDO1Q16878 200 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 C15orf59Q2T9L4 293 aaPredicted RBP19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 POM121L1PQ3SYA9 428 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 AOPEPQ8N6M6 819 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 OR2T34Q8NGX1 318 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 OR14C36Q8NHC7 312 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 JOSD2Q8TAC2 188 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 RXFP2Q8WXD0 754 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 HAPLN3Q96S86 360 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 SCNM1Q9BWG6 230 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 TM7SF3Q9NS93 570 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 DAAM1Q9Y4D1 1078 aa19.79■□□□□ 0.76
SMARCB1-204ENST00000407422 FREM2Q5SZK8 3169 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 ZFHX4Q86UP3 3567 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 A0A1W2PPC4 97 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 K7ERQ8 282 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 BNIP3LO60238 219 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 ENDOD1O94919 500 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 SRCP12931 536 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 TRIP6Q15654 476 aaKnown RBP19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 CCDC14Q49A88 953 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 TRIM72Q6ZMU5 477 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 OR8D1Q8WZ84 308 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 SLC6A18Q96N87 628 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 ERGIC2Q96RQ1 377 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 ZNF212Q9UDV6 495 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 VPS51Q9UID3 782 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 HS3ST2Q9Y278 367 aa19.78■□□□□ 0.76
SMARCB1-204ENST00000407422 HYAL3O43820 417 aaPredicted RBP19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 ZNF883P0CG24 379 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 GLDCP23378 1020 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 OR1E1P30953 314 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 ST3GAL2Q16842 350 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 LINGO4Q6UY18 593 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 SETD3Q86TU7 594 aaPredicted RBP19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 OR7D4Q8NG98 312 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 SETD7Q8WTS6 366 aaKnown RBP19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 C2orf49Q9BVC5 232 aaPredicted RBP19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 TMEM51Q9NW97 253 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 PPM1HQ9ULR3 514 aa19.77■□□□□ 0.76
SMARCB1-204ENST00000407422 DMXL2Q8TDJ6 3036 aa19.77■□□□□ 0.75
SMARCB1-204ENST00000407422 C2CD4BA6NLJ0 364 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 WNT9AO14904 365 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 MCF2LO15068 1137 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 SMAD6O43541 496 aaKnown RBP19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 CBFA2T3O75081 653 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 RTN2O75298 545 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 RRM1P23921 792 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 RACK1P63244 317 aaKnown RBP19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 KRT83P78385 493 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 CLEC16AQ2KHT3 1053 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 ATP11CQ8NB49 1132 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 MAGEB5Q9BZ81 275 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 PCOLCE2Q9UKZ9 415 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 PCDHB9Q9Y5E1 797 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 C1QTNF9BB2RNN3 333 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 C1QTNF9P0C862 333 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 SDC4P31431 198 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 NSFP46459 744 aaKnown RBP19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 CCR5P51681 352 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 PPP2CBP62714 309 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 PPP2CAP67775 309 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 HNRNPDQ14103 355 aaKnown RBP19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 ANO6Q4KMQ2 910 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 C6orf118Q5T5N4 469 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 ACBD5Q5T8D3 534 aaPredicted RBP19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 ADAT2Q7Z6V5 191 aaKnown RBP19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 DSG4Q86SJ6 1040 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 PIP4K2CQ8TBX8 421 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 FAM131CQ96AQ9 280 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 ZYG11BQ9C0D3 744 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 ADAM22Q9P0K1 906 aa19.76■□□□□ 0.75
SMARCB1-204ENST00000407422 CHD5Q8TDI0 1954 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3DA0A087WVF3 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3IA0A087WXS9 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3EA0A087X179 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3KA0A087X1G2 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3FA6NER0 549 aaPredicted RBP19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3LB9A6J9 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 WNT1P04628 370 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 CTSLP07711 333 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3HP0C7X1 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 RFC1P35251 1148 aaPredicted RBP19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 CTSKP43235 329 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 CNTN1Q12860 1018 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3GQ6DHY5 549 aa19.75■□□□□ 0.75
SMARCB1-204ENST00000407422 TBC1D3CQ6IPX1 549 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms