RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SLC39A8Q9C0K1 460 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 CDC42EP4Q9H3Q1 356 aaKnown RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 PIDD1Q9HB75 910 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 SMPD4Q9NXE4 827 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ZMYM5Q9UJ78 669 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 STOML2Q9UJZ1 356 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ZNF510Q9Y2H8 683 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 CPQQ9Y646 472 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 C2orf16Q68DN1 1984 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 TRIOO75962 3097 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 KCNK1O00180 336 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 RIPK2O43353 540 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 NUDT17P0C025 328 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 YBEYP58557 167 aaPredicted RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 FAM193AP78312 1265 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 SARNPP82979 210 aaKnown RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 ALFQ53S48 1182 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 ZNF567Q8N184 647 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 TAB3Q8N5C8 712 aaPredicted RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 SEMA4AQ9H3S1 761 aa21.48■■□□□ 1.03
TPM1-208ENST00000404484 EIF2B3Q9NR50 452 aaKnown RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 AGO1Q9UL18 857 aaKnown RBP21.48■■□□□ 1.03
TPM1-208ENST00000404484 DENND4CQ5VZ89 1909 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 GOLGA6L7A0A1B0GV03 622 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 A0A1W2PRU2 124 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 C2CD4DB7Z1M9 353 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 RAMP2O60895 175 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 CNTN5O94779 1100 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 TMEM63AO94886 807 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 METTL18O95568 372 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 KLKB1P03952 638 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 APRTP07741 180 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 MAGEA4P43358 317 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 LMAN1P49257 510 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 CDH4P55283 916 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 IFI35P80217 286 aaPredicted RBP21.47■■□□□ 1.03
TPM1-208ENST00000404484 TEX44Q53QW1 395 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 CHST9Q7L1S5 443 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 PID1Q7Z2X4 250 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 CROCCP2Q86T23 111 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 RNF135Q8IUD6 432 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 MAB21L3Q8N8X9 362 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 PPP1R2P1Q96PQ5 205 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 SAYSD1Q9NPB0 183 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 NDFIP2Q9NV92 336 aa21.47■■□□□ 1.03
TPM1-208ENST00000404484 NUP205Q92621 2012 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 GOLGA6L10A6NI86 522 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 MATN3O15232 486 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 CLDN11O75508 207 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 TTC4O95801 387 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 OR1E1P30953 314 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 SLC6A4P31645 630 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 PAPOLAP51003 745 aaKnown RBP21.46■■□□□ 1.03
TPM1-208ENST00000404484 IFFO1Q0D2I5 559 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 CBLBQ13191 982 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 GRASPQ7Z6J2 395 aaPredicted RBP21.46■■□□□ 1.03
TPM1-208ENST00000404484 SLC22A12Q96S37 553 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 CYP2S1Q96SQ9 504 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 DNAJC17Q9NVM6 304 aaKnown RBP21.46■■□□□ 1.03
TPM1-208ENST00000404484 ZNF212Q9UDV6 495 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 IPO11Q9UI26 975 aaKnown RBP21.46■■□□□ 1.03
TPM1-208ENST00000404484 MYO10Q9HD67 2058 aa21.46■■□□□ 1.03
TPM1-208ENST00000404484 TCRBV7S3A2A0A539 114 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 TYW5A2RUC4 315 aaKnown RBP21.45■■□□□ 1.02
TPM1-208ENST00000404484 RASA4BC9J798 803 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 E7ESA3 106 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 GOLGA8MH3BSY2 632 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 ALOX15BO15296 676 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 RASA4O43374 803 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 MAFKO60675 156 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 IRAK1P51617 712 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 FAXCQ5TGI0 409 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 DEPDC1BQ8WUY9 529 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 NSMCE1Q8WV22 266 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 TEKT5Q96M29 485 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 PWWP2AQ96N64 755 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 GBA3Q9H227 469 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 EPB41L4BQ9H329 900 aa21.45■■□□□ 1.02
TPM1-208ENST00000404484 NOL6Q9H6R4 1146 aaKnown RBP21.45■■□□□ 1.02
TPM1-208ENST00000404484 XAB2Q9HCS7 855 aaKnown RBP21.45■■□□□ 1.02
TPM1-208ENST00000404484 A0A1B0GVM2 712 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 GOLGA6CA6NDK9 693 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 TCAF2A6NFQ2 919 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 ERI2A8K979 691 aaKnown RBP21.44■■□□□ 1.02
TPM1-208ENST00000404484 AGPSO00116 658 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 RHOP08100 348 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 GOLGA6DP0CG33 693 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 CCNB1P14635 433 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 NTHL1P78549 312 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 PDIA2Q13087 525 aaKnown RBP21.44■■□□□ 1.02
TPM1-208ENST00000404484 PRPSAP1Q14558 356 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 POLD3Q15054 466 aaPredicted RBP21.44■■□□□ 1.02
TPM1-208ENST00000404484 DNAJC21Q5F1R6 531 aaKnown RBP21.44■■□□□ 1.02
TPM1-208ENST00000404484 C6orf118Q5T5N4 469 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 RFWD3Q6PCD5 774 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 SHKBP1Q8TBC3 707 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 SH3GL2Q99962 352 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 HCFC1R1Q9NWW0 138 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 GOLGA6AQ9NYA3 693 aa21.44■■□□□ 1.02
TPM1-208ENST00000404484 NINJ2Q9NZG7 142 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms