RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 PSMB4P28070 264 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 MLH1P40692 756 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 BCAT1P54687 386 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ITGA9Q13797 1035 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 GRM2Q14416 872 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ANKDD1AQ495B1 522 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 LDLRAD1Q5T700 205 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 OTUD1Q5VV17 481 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 ZNF410Q86VK4 478 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 MS4A4AQ96JQ5 239 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 WDR55Q9H6Y2 383 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 M0QYT0 321 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 RNF103O00237 685 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ZBTB14O43829 449 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 CCR10P46092 362 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 IDH3AP50213 366 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 SH2D4BQ5SQS7 431 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 WSCD1Q658N2 575 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 RBM12BQ8IXT5 1001 aaKnown RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 APPL2Q8NEU8 664 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 P2RY11Q96G91 374 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 CDRT15Q96T59 188 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 PRDM12Q9H4Q4 367 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 CAAP1Q9H8G2 361 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 PNPLA8Q9NP80 782 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 I6L893 689 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 NRP1O14786 923 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 GCATO75600 419 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ZNF189O75820 626 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 ERVK-10P10266 1014 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ENO3P13929 434 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 MAGEA3P43357 314 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 PTPN9P43378 593 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 CBX3Q13185 183 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 TUBB3Q13509 450 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 C16orf72Q14CZ0 275 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 KYAT1Q16773 422 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 KIAA0319Q5VV43 1072 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ITPRIPL1Q6GPH6 555 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 ALKAL1Q6UXT8 129 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 CENPIQ92674 756 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 QKIQ96PU8 341 aaKnown RBP eCLIP14.39□□□□□ -0.11
ATG3-202ENST00000402314 APOL2Q9BQE5 337 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 SENP6Q9GZR1 1112 aaPredicted RBP14.39□□□□□ -0.11
ATG3-202ENST00000402314 THAP1Q9NVV9 213 aa14.39□□□□□ -0.11
ATG3-202ENST00000402314 NUP205Q92621 2012 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 ZNF638Q14966 1978 aaKnown RBP14.38□□□□□ -0.11
ATG3-202ENST00000402314 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.119e-6■■■■■ 68.9
ATG3-202ENST00000402314 PIRO00625 290 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 SPAG6O75602 509 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 TRMUO75648 421 aaKnown RBP14.38□□□□□ -0.11
ATG3-202ENST00000402314 TSHRP16473 764 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 XRCC1P18887 633 aaPredicted RBP14.38□□□□□ -0.11
ATG3-202ENST00000402314 ARL4AP40617 200 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 MAP3K7CLP57077 242 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 SNX17Q15036 470 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 TEDDM1Q5T9Z0 273 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 KLC3Q6P597 504 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 AAGABQ6PD74 315 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 SPNS2Q8IVW8 549 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 PQLC1Q8N2U9 271 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 FBXW8Q8N3Y1 598 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 LRRC52Q8N7C0 313 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 TRIML2Q8N7C3 387 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 LENG8Q96PV6 779 aaPredicted RBP14.38□□□□□ -0.11
ATG3-202ENST00000402314 KCNK16Q96T55 309 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 TMEM30AQ9NV96 361 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 UBQLN1Q9UMX0 589 aaKnown RBP14.38□□□□□ -0.11
ATG3-202ENST00000402314 ZNF232Q9UNY5 417 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 USP3Q9Y6I4 520 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 BPTFQ12830 3046 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 COL1A2P08123 1366 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 FAM159BA6NKW6 160 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 SETSIPP0DME0 302 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 AOC1P19801 751 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 MAPK10P53779 464 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 MAP3K21Q5TCX8 1036 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 NT5DC4Q86YG4 428 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 B3GALNT2Q8NCR0 500 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
ATG3-202ENST00000402314 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 PIGVQ9NUD9 493 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 SYBUQ9NX95 663 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 ZDHHC7Q9NXF8 308 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 CPA4Q9UI42 421 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 SBF1O95248 1867 aa14.38□□□□□ -0.11
ATG3-202ENST00000402314 KRT38O76015 456 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 LILRA4P59901 499 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 DCTN2Q13561 401 aaKnown RBP14.37□□□□□ -0.11
ATG3-202ENST00000402314 TMEM259Q4ZIN3 620 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 PAQR9Q6ZVX9 377 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 UNC93AQ86WB7 457 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 LILRA2Q8N149 483 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 RNF139Q8WU17 664 aa14.37□□□□□ -0.11
ATG3-202ENST00000402314 PTPN18Q99952 460 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms