RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 CASTOR2A6NHX0 329 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CFAP99D6REC4 459 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 NDC80O14777 642 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CASQ2O14958 399 aaPredicted RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 ITM2AO43736 263 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CD4P01730 458 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 ACRP10323 421 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 SYN1P17600 705 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CDKN2BP42772 138 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 STT3AP46977 705 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 YWHAGP61981 247 aaKnown RBP eCLIP8.12□□□□□ -1.11
RERE-203ENST00000400907 PDK1Q15118 436 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 TFDP3Q5H9I0 405 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 OGFRL1Q5TC84 451 aaPredicted RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 SDE2Q6IQ49 451 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 DENND1BQ6P3S1 775 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 ATG14Q6ZNE5 492 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 RTN4RL1Q86UN2 441 aaPredicted RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 KBTBD6Q86V97 674 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CRLF3Q8IUI8 442 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 PDIK1LQ8N165 341 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 HASPINQ8TF76 798 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 IRGQQ8WZA9 623 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 SLC35B4Q969S0 331 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 BTBD9Q96Q07 612 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 TIMMDC1Q9NPL8 285 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CISHQ9NSE2 258 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 MIOSQ9NXC5 875 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 DPP3Q9NY33 737 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 HMGXB4Q9UGU5 601 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 DMTF1Q9Y222 760 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 SRGAP2BP0DMP2 458 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CD46P15529 392 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CDH2P19022 906 aaPredicted RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 ITGB8P26012 769 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 MSX2P35548 267 aaPredicted RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 COPAP53621 1224 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 PSMC1P62191 440 aaKnown RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 XIAPP98170 497 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 CNGA3Q16281 694 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 ZNF699Q32M78 642 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 C6orf52Q5T4I8 152 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 FRMD7Q6ZUT3 714 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 AMIGO2Q86SJ2 522 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 KCTD6Q8NC69 237 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 FNDC8Q8TC99 324 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 TMIGD2Q96BF3 282 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 SLX1AQ9BQ83 275 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 LPIN3Q9BQK8 851 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 MAGEB5Q9BZ81 275 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 MRPL47Q9HD33 250 aaKnown RBP8.12□□□□□ -1.11
RERE-203ENST00000400907 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 AP4B1Q9Y6B7 739 aa8.12□□□□□ -1.11
RERE-203ENST00000400907 SIN3BO75182 1162 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 SNNO75324 88 aaPredicted RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 RFPL1O75677 317 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 IL18RAPO95256 599 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 C1QAP02745 245 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 RBP3P10745 1247 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 CSF2RAP15509 400 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 GATMP50440 423 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 GPNMBQ14956 572 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 PPP6R3Q5H9R7 873 aaPredicted RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 VWA5B1Q5TIE3 1220 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 ATG16L1Q676U5 607 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 AGMOQ6ZNB7 445 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 POLNQ7Z5Q5 900 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 NUP93Q8N1F7 819 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 TSPAN18Q96SJ8 248 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 ASB7Q9H672 318 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 PCDH18Q9HCL0 1135 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 SIX4Q9UIU6 781 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 SNX9Q9Y5X1 595 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 CEPT1Q9Y6K0 416 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 CLTBP09497 229 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 TFPTP0C1Z6 253 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 ITGAXP20702 1163 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 IL1R2P27930 398 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 CDKL1Q00532 357 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 PCBP1Q15365 356 aaKnown RBP eCLIP8.11□□□□□ -1.111e-8■■■■□ 22.3
RERE-203ENST00000400907 C15orf59Q2T9L4 293 aaPredicted RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 MAVSQ7Z434 540 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 PCGF5Q86SE9 256 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 HACE1Q8IYU2 909 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 RNF168Q8IYW5 571 aaPredicted RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 PHTF2Q8N3S3 785 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 ACTRT2Q8TDY3 377 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 TFB1MQ8WVM0 346 aaKnown RBP8.11□□□□□ -1.11
RERE-203ENST00000400907 HPDLQ96IR7 371 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 SNX27Q96L92 541 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 PAAF1Q9BRP4 392 aa8.11□□□□□ -1.11
RERE-203ENST00000400907 MRPS26Q9BYN8 205 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms