RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DCTN4Q9UJW0 460 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 A0A1W2PQH9 124 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TMEM150BA6NC51 233 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 E5RJQ4 531 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 F8VP50 259 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 HOXC12P31275 282 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 DUSP3P51452 185 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 COPZ1P61923 177 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SLC20A2Q08357 652 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PARP15Q460N3 678 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TJAP1Q5JTD0 557 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 HIBCHQ6NVY1 386 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 OR56A4Q8NGH8 313 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SCLYQ96I15 445 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PPP1R10Q96QC0 940 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 ASB8Q9H765 288 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 AGO1Q9UL18 857 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 PNMA8BQ9ULN7 279 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 PCDHGC5Q9Y5F6 944 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 IDSP22304 550 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 RPL3P39023 403 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 GPR15P49685 360 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 UAP1L1Q3KQV9 507 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 ATP13A4Q4VNC1 1196 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 HCAR2Q8TDS4 363 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 CPNE1Q99829 537 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 ELAC2Q9BQ52 826 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 ILKAPQ9H0C8 392 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 VTI1BQ9UEU0 232 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 PCDHA11Q9Y5I1 949 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TNPO3Q9Y5L0 923 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 SLC38A8A6NNN8 435 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 GOLGA8RI6L899 631 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 AGRPO00253 132 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TRDMT1O14717 391 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 PIM1P11309 404 aaPredicted RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 ILF3Q12906 894 aaKnown RBP eCLIP8.08□□□□□ -1.127e-8■■■□□ 14.9
USP47-203ENST00000399455 CASP8Q14790 479 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TMEM259Q4ZIN3 620 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 MYCBPAPQ8TBZ2 947 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 SETD7Q8WTS6 366 aaKnown RBP8.08□□□□□ -1.12
USP47-203ENST00000399455 TUBGCP3Q96CW5 907 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 ACOX2Q99424 681 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 C3orf14Q9HBI5 128 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 WHRNQ9P202 907 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 HCN4Q9Y3Q4 1203 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 TAF6LQ9Y6J9 622 aa8.08□□□□□ -1.12
USP47-203ENST00000399455 E2F8A0AVK6 867 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 SLCO1B7G3V0H7 640 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 TK2O00142 265 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 EML1O00423 815 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 MLYCDO95822 493 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 BRCC3P46736 316 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 RPL21P46778 160 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 RALGDSQ12967 914 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 C11orf63Q6NUN7 778 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 TRIM69Q86WT6 500 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 EMC1Q8N766 993 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 KLHL23Q8NBE8 558 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 SPATA20Q8TB22 786 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ASB2Q96Q27 587 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 SFXN1Q9H9B4 322 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 KRT84Q9NSB2 600 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 AGPAT5Q9NUQ2 364 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 FAF1Q9UNN5 650 aaPredicted RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 SLC25A12O75746 678 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 IFNGR2P38484 337 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 STX5Q13190 355 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 MROH9Q5TGP6 573 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 KCNMB4Q86W47 210 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 CCDC185Q8N715 623 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ARIH1Q9Y4X5 557 aaPredicted RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 ANKRD63C9JTQ0 380 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 MEIS2O14770 477 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 KLK7P49862 253 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 CSHL1Q14406 222 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 HIC1Q14526 733 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 GRIK5Q16478 980 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 C1orf186Q6ZWK4 172 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 PXYLP1Q8TE99 480 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 DENND1AQ8TEH3 1009 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ABCB6Q9NP58 842 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ERI2A8K979 691 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 RGS14O43566 566 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 TKTP29401 623 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 CD86P42081 329 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 MRPS5P82675 430 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 CSTF3Q12996 717 aaKnown RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 CCL14Q16627 93 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 BEND6Q5SZJ8 279 aaPredicted RBP8.07□□□□□ -1.12
USP47-203ENST00000399455 RASIP1Q5U651 963 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 BHLHB9Q6PI77 547 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 FAM183BPQ6ZVS7 135 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 ACBD6Q9BR61 282 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 OSBPL10Q9BXB5 764 aa8.07□□□□□ -1.12
USP47-203ENST00000399455 CCDC90BQ9GZT6 254 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms