RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 BRMS1LQ5PSV4 323 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 FBXL22Q6P050 247 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 LINC00114Q6XXX2 140 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 MMS22LQ6ZRQ5 1243 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 SLC20A1Q8WUM9 679 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 ZNF419Q96HQ0 510 aaPredicted RBP12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 ERGIC2Q96RQ1 377 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 NUP58Q9BVL2 599 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 SIK2Q9H0K1 926 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 HSD3B7Q9H2F3 369 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 TMEM74BQ9NUR3 256 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 WSB2Q9NYS7 404 aaPredicted RBP12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 USP36Q9P275 1121 aaKnown RBP12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 PILRBQ9UKJ0 227 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 INTS6Q9UL03 887 aaKnown RBP12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 PAXBP1Q9Y5B6 917 aa12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 MYO18AQ92614 2054 aaKnown RBP12.14□□□□□ -0.47
SMIM11A-201ENST00000399292 EML5Q05BV3 1969 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 PATE3B3GLJ2 98 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 GOLGA8SH3BPF8 625 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 PAGE1O75459 146 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 SRPRAP08240 638 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 CHRNB2P17787 502 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 HOXD12P35452 270 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 CXCR3P49682 368 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 IRX4P78413 519 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ECT2LQ008S8 904 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 DEUP1Q05D60 604 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 TRIM61Q5EBN2 209 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ARSJQ5FYB0 599 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 SYCP2LQ5T4T6 812 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 RNF219Q5W0B1 726 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 TRIM72Q6ZMU5 477 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ARCQ7LC44 396 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 CCAR2Q8N163 923 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 KDM1BQ8NB78 822 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 CEP76Q8TAP6 659 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 PGAP3Q96FM1 320 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 TOE1Q96GM8 510 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 BTBD6Q96KE9 485 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 RPRD1AQ96P16 312 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 EDEM2Q9BV94 578 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 NUSAP1Q9BXS6 441 aaKnown RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 TKTL2Q9H0I9 626 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 FBRSQ9HAH7 460 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 CD93Q9NPY3 652 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 PRSS16Q9NQE7 514 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 PIGVQ9NUD9 493 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ARHGEF38Q9NXL2 777 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 EVLQ9UI08 416 aaPredicted RBP12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 VANGL2Q9ULK5 521 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 ERVW-1Q9UQF0 538 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 HS3ST4Q9Y661 456 aa12.13□□□□□ -0.47
SMIM11A-201ENST00000399292 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 A0A1B0GVM2 712 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 LNP1A1A4G5 178 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 TCAF2A6NFQ2 919 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 C4orf47A7E2U8 309 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ADCY5O95622 1261 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 DNTTP04053 509 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 CCDC172P0C7W6 258 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 TFE3P19532 575 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 MMP8P22894 467 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 FLT3P36888 993 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 NNMTP40261 264 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ZNF165P49910 485 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 FMO1Q01740 532 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ZBTB16Q05516 673 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 TNP2Q05952 138 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ZNF177Q13360 481 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 DUOXA1Q1HG43 343 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ACBD5Q5T8D3 534 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 SLC23A3Q6PIS1 610 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 C14orf80Q86SX3 495 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 CIR1Q86X95 450 aaPredicted RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 SLC41A1Q8IVJ1 513 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 RGL4Q8IZJ4 473 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 ABCA7Q8IZY2 2146 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 APCDD1Q8J025 514 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 CADM4Q8NFZ8 388 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 SLC30A5Q8TAD4 765 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 IGSF8Q969P0 613 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 MYO19Q96H55 970 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 MRGPRX3Q96LB0 322 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 C1orf74Q96LT6 269 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 HSPA12BQ96MM6 686 aa12.12□□□□□ -0.47
SMIM11A-201ENST00000399292 TBCBQ99426 244 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms