RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 MAGEA12P43365 314 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 GLRBP48167 497 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 NDST2P52849 883 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 LIMK2P53671 638 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 PTK2BQ14289 1009 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 KRT80Q6KB66 452 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 CCNYQ8ND76 341 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 URGCPQ8TCY9 931 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 MINDY3Q9H8M7 445 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 EFCAB1Q9HAE3 211 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 ANLNQ9NQW6 1124 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 CDYLQ9Y232 598 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 ZNF711Q9Y462 761 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 TRIP11Q15643 1979 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 GABBR2O75899 941 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 FARP2O94887 1054 aaPredicted RBP14.24□□□□□ -0.13
APOB-202ENST00000399256 IL18RAPO95256 599 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 H6PDO95479 791 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 TFEBP19484 476 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 MAGEA8P43361 318 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 CLCN2P51788 898 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 TMEM62Q0P6H9 643 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 EML3Q32P44 896 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 EEPD1Q7L9B9 569 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 CXorf38Q8TB03 319 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 P2RY11Q96G91 374 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 PPP1R16BQ96T49 567 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 LPIN3Q9BQK8 851 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 TASP1Q9H6P5 420 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 CYP3A43Q9HB55 503 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 OXSMQ9NWU1 459 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 PLOD2O00469 737 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 ACKR2O00590 384 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 SUPT3HO75486 399 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 ENTPD1P49961 510 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 NAGLUP54802 743 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 FAM160B1Q5W0V3 765 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 GK5Q6ZS86 529 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 SETD3Q86TU7 594 aaPredicted RBP14.24□□□□□ -0.13
APOB-202ENST00000399256 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 ACE2Q9BYF1 805 aaPredicted RBP14.24□□□□□ -0.13
APOB-202ENST00000399256 ZNF385DQ9H6B1 395 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 RRN3Q9NYV6 651 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 SNX13Q9Y5W8 968 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 SNX9Q9Y5X1 595 aa14.24□□□□□ -0.13
APOB-202ENST00000399256 COPG1Q9Y678 874 aaKnown RBP14.24□□□□□ -0.13
APOB-202ENST00000399256 GOLGA8TH3BQL2 631 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 BOLA2-SMG1P6H3BVE0 249 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 PEX10O60683 326 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 CAPNS1P04632 268 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 ALDH3B2P48448 385 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 HMGCS2P54868 508 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 IKBKEQ14164 716 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 MXD4Q14582 209 aaPredicted RBP14.23□□□□□ -0.13
APOB-202ENST00000399256 MTX3Q5HYI7 312 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 SPANXN3Q5MJ09 141 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 CLEC14AQ86T13 490 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 CPSF7Q8N684 471 aaKnown RBP14.23□□□□□ -0.13
APOB-202ENST00000399256 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 SLC29A1Q99808 456 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 NAT9Q9BTE0 207 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 ZBTB26Q9HCK0 441 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 ADAM28Q9UKQ2 775 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 FZD1Q9UP38 647 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 AP4S1Q9Y587 144 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 TMEM233B4DJY2 109 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 TRIM38O00635 465 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 C16orf72Q14CZ0 275 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
APOB-202ENST00000399256 ZNF597Q96LX8 424 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 CIB1Q99828 191 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 DRC3Q9H069 523 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 TMPRSS4Q9NRS4 437 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 SLC39A10Q9ULF5 831 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 MYRFQ9Y2G1 1151 aa14.23□□□□□ -0.13
APOB-202ENST00000399256 TCAF2A6NFQ2 919 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 KCNU1A8MYU2 1149 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 H3BNH8 94 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 FOXD2O60548 495 aaPredicted RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 MPOP05164 745 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 IQCF3P0C7M6 154 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 AVPR1AP37288 418 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 TXNL4AP83876 142 aaKnown RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 PLOD1Q02809 727 aaPredicted RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 RALGDSQ12967 914 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 ITPRIPL1Q6GPH6 555 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 CARM1Q86X55 608 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 GPC2Q8N158 579 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 ISL2Q96A47 359 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 RMND5BQ96G75 393 aaPredicted RBP14.22□□□□□ -0.13
APOB-202ENST00000399256 TEX13BQ9BXU2 312 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 C2orf40Q9H1Z8 148 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 PDGFRBP09619 1106 aa14.22□□□□□ -0.13
APOB-202ENST00000399256 ICAM3P32942 547 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms