RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CIR1Q86X95 450 aaPredicted RBP10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 CCDC117Q8IWD4 279 aaPredicted RBP10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 TRIM59Q8IWR1 403 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 STK40Q8N2I9 435 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 ZNF557Q8N988 423 aaPredicted RBP10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 ZNF606Q8WXB4 792 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 IGSF8Q969P0 613 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 FAM129BQ96TA1 746 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 OMDQ99983 421 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 CRACR2AQ9BSW2 395 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 SRRTQ9BXP5 876 aaKnown RBP10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 CCDC86Q9H6F5 360 aaKnown RBP10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 OSGEPQ9NPF4 335 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 TJP2Q9UDY2 1190 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 CNTN6Q9UQ52 1028 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 CEP83Q9Y592 693 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 MYLKQ15746 1914 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 IGSF10Q6WRI0 2623 aa10.13□□□□□ -0.79
NIFKP1-201ENST00000398317 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 EDDM13A0A1B0GTR0 161 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 A0A1W2PPC4 97 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 TARSL2A2RTX5 802 aaKnown RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 CDC14CA4D256 554 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 FAM149AA5PLN7 773 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 WNT9AO14904 365 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 SART1O43290 800 aaKnown RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 THAP12O43422 761 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 DKK1O94907 266 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 MOCS3O95396 460 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 GNA14O95837 355 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 TRUB2O95900 331 aaKnown RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 APOEP02649 317 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 WNT1P04628 370 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 SRPRAP08240 638 aaKnown RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 VAV1P15498 845 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 PDGFRAP16234 1089 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 GNA15P30679 374 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 SLC8A1P32418 973 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 GDF10P55107 478 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 C21orf59P57076 290 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 APBA1Q02410 837 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 PAK1Q13153 545 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 COL9A2Q14055 689 aaPredicted RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 ARHGAP44Q17R89 818 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 RNF219Q5W0B1 726 aaPredicted RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 GATAD2AQ86YP4 633 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 ELOA2Q8IYF1 753 aaPredicted RBP10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 AADATQ8N5Z0 425 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 OR14C36Q8NHC7 312 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 PTPRN2Q92932 1015 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 GRIP2Q9C0E4 1043 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 POPDC2Q9HBU9 364 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 COX16Q9P0S2 106 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 SCML1Q9UN30 329 aa10.12□□□□□ -0.79
NIFKP1-201ENST00000398317 LRRC72A6NJI9 287 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 F5H5T6 163 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 CBX4O00257 560 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 PLK4O00444 970 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 VILLO15195 856 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 MED7O43513 233 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 TNFSF14O43557 240 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 PCDHGA12O60330 932 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 GRAP2O75791 330 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 IGLV3-25P01717 112 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 MZF1P28698 734 aaPredicted RBP10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 GPC1P35052 558 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 USP8P40818 1118 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 GRK6P43250 576 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 YWHAZP63104 245 aaKnown RBP10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 SFSWAPQ12872 951 aaKnown RBP10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 BECN1Q14457 450 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 KCNJ12Q14500 433 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 FOXR2Q6PJQ5 311 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 SND1Q7KZF4 910 aaKnown RBP eCLIP10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 BEND5Q7L4P6 421 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 TMEM110Q86TL2 294 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 PASD1Q8IV76 773 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 ATP6V0D2Q8N8Y2 350 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 KDM1BQ8NB78 822 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 OR2T34Q8NGX1 318 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 STK32AQ8WU08 396 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 MED15Q96RN5 788 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 ACE2Q9BYF1 805 aaPredicted RBP10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 THAP9Q9H5L6 903 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 FAM204AQ9H8W3 233 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 AASDHPPTQ9NRN7 309 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 CUEDC1Q9NWM3 386 aaPredicted RBP10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 RAXQ9Y2V3 346 aa10.11□□□□□ -0.79
NIFKP1-201ENST00000398317 ITIH6Q6UXX5 1313 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 A0A1B0GTQ1 180 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 A0A1W2PR77 199 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 TRABD2BA6NFA1 517 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 BECN2A8MW95 431 aa10.1□□□□□ -0.79
NIFKP1-201ENST00000398317 KCNU1A8MYU2 1149 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms