RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 EXOC1Q9NV70 894 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 ERVW-1Q9UQF0 538 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 U3KQA8 63 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 GOLGA6L7A0A1B0GV03 622 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TYW5A2RUC4 315 aaKnown RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TTC34A8MYJ7 566 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 K7ESM1 405 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 SLC7A4O43246 635 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 CALUO43852 315 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TCEA3O75764 348 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PIAS2O75928 621 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 NEBLO76041 1014 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 KRT13P13646 458 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PDIA4P13667 645 aaKnown RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 WT1P19544 449 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 MZF1P28698 734 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 GTF2H1P32780 548 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 DRD3P35462 400 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 POLE2P56282 527 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 ELAVL3Q14576 367 aaKnown RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PITRM1Q5JRX3 1037 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 FHL5Q5TD97 284 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 NADSYN1Q6IA69 706 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TRIM69Q86WT6 500 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 STK40Q8N2I9 435 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 KCTD13Q8WZ19 329 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PTPRN2Q92932 1015 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TATDN2Q93075 761 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 MIB2Q96AX9 1013 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PRICKLE1Q96MT3 831 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF396Q96N95 335 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 MYOCQ99972 504 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 DDX50Q9BQ39 737 aaKnown RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 CAAP1Q9H8G2 361 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF71Q9NQZ8 489 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-203ENST00000397378 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 STIM2Q9P246 746 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 CYTH4Q9UIA0 394 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 TSPAN16Q9UKR8 245 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 CA5BQ9Y2D0 317 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PCDHGA7Q9Y5G6 932 aa9.72□□□□□ -0.85
NEDD9-203ENST00000397378 PRAMEF26H0Y7S4 382 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 MTSS1O43312 755 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 PLRG1O43660 514 aaKnown RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 RNGTTO60942 597 aaKnown RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 LUC7L3O95232 432 aaKnown RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 MOCS3O95396 460 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 NR2F2P24468 414 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 COL8A1P27658 744 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 OXCT1P55809 520 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 DAOAP59103 153 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 RPS24P62847 133 aaKnown RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 ECT2LQ008S8 904 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 KCNMA1Q12791 1236 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 CDH18Q13634 790 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 SPIDRQ14159 915 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 FSCBQ5H9T9 825 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 RESP18Q5W5W9 173 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 KRT39Q6A163 491 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 ZCCHC8Q6NZY4 707 aaKnown RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 DSG4Q86SJ6 1040 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 TICAM1Q8IUC6 712 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 CCDC117Q8IWD4 279 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-203ENST00000397378 FAM186BQ8IYM0 893 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 GRAMD1CQ8IYS0 662 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 CEP57L1Q8IYX8 460 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 SIX6OS1Q8N1H7 587 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 FBXO39Q8N4B4 442 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 TPCN2Q8NHX9 752 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 IRGQQ8WZA9 623 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 SEMA4DQ92854 862 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 CALN1Q9BXU9 219 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 EPB41L5Q9HCM4 733 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 KLHL11Q9NVR0 708 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 HESX1Q9UBX0 185 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 TUBD1Q9UJT1 453 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
NEDD9-203ENST00000397378 SCAMP1O15126 338 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 IL1BP01584 269 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 UGT1A5P35504 534 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 PSMC2P35998 433 aaKnown RBP9.7□□□□□ -0.86
NEDD9-203ENST00000397378 DCTP40126 519 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 NNMTP40261 264 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 PDX1P52945 283 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 TBX4P57082 545 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 NNTQ13423 1086 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 DRAP1Q14919 205 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-203ENST00000397378 SETMARQ53H47 684 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-203ENST00000397378 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
NEDD9-203ENST00000397378 RNF219Q5W0B1 726 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-203ENST00000397378 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.7□□□□□ -0.86
NEDD9-203ENST00000397378 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms