RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 DNAJC16Q9Y2G8 782 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 UBTFL6P0CB48 400 aaPredicted RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 INTS6LQ5JSJ4 861 aaKnown RBP24.25■■□□□ 1.47
PABPN1-202ENST00000397276 MBLAC2Q68D91 279 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 ATG14Q6ZNE5 492 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 GALNT15Q8N3T1 639 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 ZNF778Q96MU6 729 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 CSNK1G1Q9HCP0 422 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 NMRK2Q9NPI5 230 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 SNX15Q9NRS6 342 aa24.25■■□□□ 1.47
PABPN1-202ENST00000397276 TSC2P49815 1807 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 NCAM2O15394 837 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 MSI1O43347 362 aaKnown RBP24.24■■□□□ 1.47
PABPN1-202ENST00000397276 FGF3P11487 239 aaPredicted RBP24.24■■□□□ 1.47
PABPN1-202ENST00000397276 MX2P20592 715 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SLC1A6P48664 564 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 PCLAFQ15004 111 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 ANKRD20A4Q4UJ75 823 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 PLD6Q8N2A8 252 aaKnown RBP24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SMC1BQ8NDV3 1235 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SPATA22Q8NHS9 363 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 HDAC11Q96DB2 347 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 GBA3Q9H227 469 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SPC25Q9HBM1 224 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.24■■□□□ 1.472e-11■□□□□ 8.8
PABPN1-202ENST00000397276 DCDC2Q9UHG0 476 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 ANKRD33BA6NCL7 494 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 IGHA2P01877 340 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 ASGR1P07306 291 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 OR4Q2P0C623 313 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SAT1P21673 171 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 HCAR3P49019 387 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 ROR2Q01974 943 aaKnown RBP24.24■■□□□ 1.47
PABPN1-202ENST00000397276 GALNT2Q10471 571 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 ACMSDQ8TDX5 336 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 ACBD6Q9BR61 282 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 WWP1Q9H0M0 922 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 SCOCQ9UIL1 159 aa24.24■■□□□ 1.47
PABPN1-202ENST00000397276 BPTFQ12830 3046 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 ZCWPW2A0A1B0GU75 182 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 KLHL33A6NCF5 533 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 PRKCGP05129 697 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 SERPINB6P35237 376 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 MGAT3Q09327 533 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 UBAP2LQ14157 1087 aaKnown RBP24.23■■□□□ 1.47
PABPN1-202ENST00000397276 FSTL4Q6MZW2 842 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 CPNE1Q99829 537 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 TUBB6Q9BUF5 446 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 VCXQ9H320 206 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 DMAP1Q9NPF5 467 aaPredicted RBP24.23■■□□□ 1.47
PABPN1-202ENST00000397276 C20orf96Q9NUD7 363 aaPredicted RBP24.23■■□□□ 1.47
PABPN1-202ENST00000397276 B2RBV5 119 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 ZCCHC18P0CG32 403 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 KCTD11Q693B1 232 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 OVOS1Q6IE37 1185 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 ACVR1CQ8NER5 493 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 CLPTM1LQ96KA5 538 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 CASS4Q9NQ75 786 aa24.23■■□□□ 1.47
PABPN1-202ENST00000397276 CPSF2Q9P2I0 782 aaKnown RBP24.23■■□□□ 1.47
PABPN1-202ENST00000397276 HNRNPCL1O60812 293 aaKnown RBP24.22■■□□□ 1.47
PABPN1-202ENST00000397276 SKIP12755 728 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 CYBAP13498 195 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 TEDDM1Q5T9Z0 273 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 GRTP1Q5TC63 336 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 FAM171BQ6P995 826 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 CD300LGQ6UXG3 332 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 KDELC2Q7Z4H8 507 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 TMEM135Q86UB9 458 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 CNTD1Q8N815 330 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 IARS2Q9NSE4 1012 aaKnown RBP24.22■■□□□ 1.47
PABPN1-202ENST00000397276 KPNA6O60684 536 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 MOCS2O96007 188 aaPredicted RBP24.22■■□□□ 1.47
PABPN1-202ENST00000397276 MT-CYBP00156 380 aaPredicted RBP24.22■■□□□ 1.47
PABPN1-202ENST00000397276 IRF9Q00978 393 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 KRT72Q14CN4 511 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 PM20D1Q6GTS8 502 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 TEKT5Q96M29 485 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 PNPOQ9NVS9 261 aa24.22■■□□□ 1.47
PABPN1-202ENST00000397276 RPL26L1Q9UNX3 145 aaKnown RBP24.22■■□□□ 1.47
PABPN1-202ENST00000397276 NMBRP28336 390 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 GRIK1P39086 918 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 ITGA9Q13797 1035 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 MRPL10Q7Z7H8 261 aaKnown RBP24.21■■□□□ 1.47
PABPN1-202ENST00000397276 MFN1Q8IWA4 741 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.21■■□□□ 1.47
PABPN1-202ENST00000397276 ZIC5Q96T25 663 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 RBBP8Q99708 897 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 ACSS2Q9NR19 701 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 RRN3Q9NYV6 651 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 SHROOM3Q8TF72 1996 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 PRR5-ARHGAP8B1AHC4 643 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 CAPN15O75808 1086 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 PROCP04070 461 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 ARHGAP8P85298 464 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 KCNA10Q16322 511 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 DCLRE1AQ6PJP8 1040 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 PIWIL2Q8TC59 973 aaKnown RBP24.21■■□□□ 1.47
PABPN1-202ENST00000397276 STMN2Q93045 179 aa24.21■■□□□ 1.47
PABPN1-202ENST00000397276 ARRB2P32121 409 aa24.2■■□□□ 1.47
PABPN1-202ENST00000397276 SPRP35270 261 aaPredicted RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms