RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CTSHP09668 335 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 FGF3P11487 239 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 PCLAFQ15004 111 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 NOMO2Q5JPE7 1267 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 PITRM1Q5JRX3 1037 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 NCBP2-AS2Q69YL0 99 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 IQSEC1Q6DN90 963 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 IRGCQ6NXR0 463 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 OTOP3Q7RTS5 596 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 ZNF567Q8N184 647 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 IPMKQ8NFU5 416 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 PARK7Q99497 189 aaKnown RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 C11orf84Q9BUA3 381 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 TRIM8Q9BZR9 551 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SSX2IPQ9Y2D8 614 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 HAS3O00219 553 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 PIRO00625 290 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 TRAFD1O14545 582 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 PLIN3O60664 434 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 MT-CYBP00156 380 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 SPATA31D3P0C874 917 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 NCAM1P13591 858 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 ACTR3P61158 418 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 MED21Q13503 144 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 GEN1Q17RS7 908 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 OR52E8Q6IFG1 317 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 RNF111Q6ZNA4 994 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SPATA31D4Q6ZUB0 917 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 TMEM110Q86TL2 294 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 LDB1Q86U70 411 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 GTF3C2Q8WUA4 911 aaPredicted RBP9.48□□□□□ -0.89
NDE1-201ENST00000396354 NPAS2Q99743 824 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 CCDC106Q9BWC9 280 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 DDIT4Q9NX09 232 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 SIRPGQ9P1W8 387 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 CDH22Q9UJ99 828 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 PCDHA11Q9Y5I1 949 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 V9GYQ6 96 aa9.48□□□□□ -0.89
NDE1-201ENST00000396354 MAGEA13PA6NCF6 341 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 CAPN14A8MX76 684 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 EEF2KO00418 725 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 PMPCBO75439 489 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 MYL3P08590 195 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 USP17L7P0C7H9 530 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 RPL10P27635 214 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 INHBEP58166 350 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 USP10Q14694 798 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 PDK1Q15118 436 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 RBBP5Q15291 538 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 MBLAC2Q68D91 279 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 FSTL4Q6MZW2 842 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 PAQR9Q6ZVX9 377 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 DENND6AQ8IWF6 608 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 TDRD5Q8NAT2 981 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 OR6Y1Q8NGX8 325 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 DIS3LQ8TF46 1054 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 RNF139Q8WU17 664 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 NDNQ99608 321 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 GCOM2Q9BZD3 368 aaPredicted RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 ANLNQ9NQW6 1124 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 CHST12Q9NRB3 414 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 NRCAMQ92823 1304 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 I6L893 689 aaPredicted RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 ZBTB24O43167 697 aaPredicted RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 IGHA2P01877 340 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 C1QAP02745 245 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 CRHR1P34998 444 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 PSEN2P49810 448 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 DEUP1Q05D60 604 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 ITKQ08881 620 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 RALGDSQ12967 914 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 PDK2Q15119 407 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 TRMT5Q32P41 509 aaKnown RBP9.47□□□□□ -0.89
NDE1-201ENST00000396354 DCAF4L1Q3SXM0 396 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 NOTUMQ6P988 496 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 DHDDSQ86SQ9 333 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 TRIM42Q8IWZ5 723 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 C3orf58Q8NDZ4 430 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 KCTD4Q8WVF5 259 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 RCN3Q96D15 328 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 PHF21BQ96EK2 531 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 CAPNS2Q96L46 248 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 PAAF1Q9BRP4 392 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 FTHL17Q9BXU8 183 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 ARHGAP39Q9C0H5 1083 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 OCEL1Q9H607 264 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.47□□□□□ -0.89
NDE1-201ENST00000396354 COPG2Q9UBF2 871 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 POMPQ9Y244 141 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 IPPQ9Y573 584 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 TSC2P49815 1807 aa9.47□□□□□ -0.89
NDE1-201ENST00000396354 A0A1B0GTW7 788 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SMIM35A0A1B0GVV1 85 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 XPO1O14980 1071 aaKnown RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 SEC24DO94855 1032 aaPredicted RBP9.46□□□□□ -0.89
NDE1-201ENST00000396354 POLBP06746 335 aa9.46□□□□□ -0.89
NDE1-201ENST00000396354 SERPINA6P08185 405 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms