RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DHTKD1Q96HY7 919 aaPredicted RBP21.72■■□□□ 1.07
TRAF4-203ENST00000394925 RPRD1AQ96P16 312 aaPredicted RBP21.72■■□□□ 1.07
TRAF4-203ENST00000394925 MYOCQ99972 504 aa21.72■■□□□ 1.07
TRAF4-203ENST00000394925 DDIT4Q9NX09 232 aa21.72■■□□□ 1.07
TRAF4-203ENST00000394925 CNTN6Q9UQ52 1028 aa21.72■■□□□ 1.07
TRAF4-203ENST00000394925 MCF2LO15068 1137 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 MED7O43513 233 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 MT-CO3P00414 261 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 VASPP50552 380 aaPredicted RBP21.71■■□□□ 1.07
TRAF4-203ENST00000394925 CDK17Q00537 523 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 E2F1Q01094 437 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 KCNH2Q12809 1159 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 TBC1D25Q3MII6 688 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 KLHL10Q6JEL2 608 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 LSM14AQ8ND56 463 aaKnown RBP21.71■■□□□ 1.07
TRAF4-203ENST00000394925 ZNF606Q8WXB4 792 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 KLK6Q92876 244 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 PPP1R9BQ96SB3 815 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 FEM1AQ9BSK4 669 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 ACP6Q9NPH0 428 aa21.71■■□□□ 1.07
TRAF4-203ENST00000394925 ATMQ13315 3056 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 GOLGA6L4A6NEF3 574 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 ALOX15BO15296 676 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 SLC31A1O15431 190 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 THAP12O43422 761 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 RNGTTO60942 597 aaKnown RBP21.7■■□□□ 1.06
TRAF4-203ENST00000394925 THEGLP0DJG4 465 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 SLC2A3P11169 496 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 PRLRP16471 622 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 DGKAP23743 735 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 CCR1P32246 355 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 IRAK1P51617 712 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 TAS2R38P59533 333 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 TLE3Q04726 772 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 HS1BP3Q53T59 392 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 ERICH1Q86X53 443 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 SPACA3Q8IXA5 215 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 DEFB106AQ8N104 65 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 INTS2Q9H0H0 1204 aaKnown RBP21.7■■□□□ 1.06
TRAF4-203ENST00000394925 PREBQ9HCU5 417 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 UBE2TQ9NPD8 197 aaPredicted RBP21.7■■□□□ 1.06
TRAF4-203ENST00000394925 UCKL1Q9NWZ5 548 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 VPS28Q9UK41 221 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 VANGL2Q9ULK5 521 aa21.7■■□□□ 1.06
TRAF4-203ENST00000394925 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.69■■□□□ 1.06
TRAF4-203ENST00000394925 TEX51A0A1B0GUA7 166 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 FFAR2O15552 330 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 GNA15P30679 374 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 GGCXP38435 758 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 CXADRP78310 365 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 ZNF177Q13360 481 aaPredicted RBP21.69■■□□□ 1.06
TRAF4-203ENST00000394925 AUHQ13825 339 aaKnown RBP21.69■■□□□ 1.06
TRAF4-203ENST00000394925 MEA1Q16626 185 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 TTI2Q6NXR4 508 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 TMC6Q7Z403 805 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 SH2D3CQ8N5H7 860 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 OR4C6Q8NH72 309 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 CAAP1Q9H8G2 361 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 KLHL11Q9NVR0 708 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 PCDHB1Q9Y5F3 818 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 OR51B4Q9Y5P0 310 aa21.69■■□□□ 1.06
TRAF4-203ENST00000394925 A0A1W2PQU0 124 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 GRAP2O75791 330 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 KCNMA1Q12791 1236 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 PDCLQ13371 301 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 TRIM59Q8IWR1 403 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 ZNF843Q8N446 348 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 TMEM145Q8NBT3 493 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 NAF1Q96HR8 494 aaKnown RBP21.68■■□□□ 1.06
TRAF4-203ENST00000394925 SLC2A13Q96QE2 648 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 LGMNQ99538 433 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 CALN1Q9BXU9 219 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 FZD3Q9NPG1 666 aa21.68■■□□□ 1.06
TRAF4-203ENST00000394925 HOOK1Q9UJC3 728 aaKnown RBP21.68■■□□□ 1.06
TRAF4-203ENST00000394925 AFPP02771 609 aaKnown RBP21.67■■□□□ 1.06
TRAF4-203ENST00000394925 CTSLP07711 333 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 NME3Q13232 169 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 PIP5KL1Q5T9C9 394 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 ZNF605Q86T29 641 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 NELFBQ8WX92 580 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 MAN1B1Q9UKM7 699 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 FARP1Q9Y4F1 1045 aaPredicted RBP21.67■■□□□ 1.06
TRAF4-203ENST00000394925 HS3ST4Q9Y661 456 aa21.67■■□□□ 1.06
TRAF4-203ENST00000394925 TENM4Q6N022 2769 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 KPNA3O00505 521 aaPredicted RBP21.66■■□□□ 1.06
TRAF4-203ENST00000394925 MT-CO1P00395 513 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 MPOP05164 745 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 GLI1P08151 1106 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 SRCP12931 536 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 PLA2G2AP14555 144 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 PPP1R2P41236 205 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 ZNF284Q2VY69 593 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 C14orf80Q86SX3 495 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 ZNF248Q8NDW4 579 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 OR13H1Q8NG92 308 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 CPXM1Q96SM3 734 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 MUC3BQ9H195 1237 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 CTNND2Q9UQB3 1225 aa21.66■■□□□ 1.06
TRAF4-203ENST00000394925 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.66■■□□□ 1.06
TRAF4-203ENST00000394925 OPA1O60313 960 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms