RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLC12A6Q9UHW9 1150 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 VPS51Q9UID3 782 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 PPM1HQ9ULR3 514 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 APOBEC2Q9Y235 224 aaKnown RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 SNX11Q9Y5W9 270 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 CFAP47Q6ZTR5 3102 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 A0A1W2PR77 199 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 TYW5A2RUC4 315 aaKnown RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 EIF4E1BA6NMX2 242 aaKnown RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 E9PAM4 449 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 RTN2O75298 545 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CLDN11O75508 207 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 RRM1P23921 792 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CD27P26842 260 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 RFC1P35251 1148 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CTSKP43235 329 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ADPRHP54922 357 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 TAS2R38P59533 333 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ST8SIA6P61647 398 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ATP11AP98196 1134 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 TYRO3Q06418 890 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF177Q13360 481 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 E2F5Q15329 346 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 STX1AQ16623 288 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CLEC16AQ2KHT3 1053 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 POM121L1PQ3SYA9 428 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 RABGAP1LQ5R372 815 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CCDC183Q5T5S1 534 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 TTC39BQ5VTQ0 682 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 AGBL4Q5VU57 503 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 KIAA0895LQ68EN5 471 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 LINGO4Q6UY18 593 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 Q6ZVU0 165 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 MON1BQ7L1V2 547 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 IRF2BP2Q7Z5L9 587 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 SLCO6A1Q86UG4 719 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 PROSER1Q86XN7 944 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF677Q86XU0 584 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CHST14Q8NCH0 376 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 OR2A12Q8NGT7 310 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 RXFP2Q8WXD0 754 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 SNX19Q92543 992 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 BAP1Q92560 729 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CENPIQ92674 756 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 SLC6A18Q96N87 628 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 FUCA2Q9BTY2 467 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ZDHHC5Q9C0B5 715 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 CCDC86Q9H6F5 360 aaKnown RBP9.09□□□□□ -0.95
ATG4A-205ENST00000394892 GAREM1Q9H706 876 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 RRN3Q9NYV6 651 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 TAS2R14Q9NYV8 317 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ARHGAP20Q9P2F6 1191 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 HS3ST2Q9Y278 367 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 ANKRD6Q9Y2G4 727 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 WDFY3Q8IZQ1 3526 aa9.09□□□□□ -0.95
ATG4A-205ENST00000394892 IGF2RP11717 2491 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 ZZEF1O43149 2961 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 A0A1W2PPC4 97 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 FAM47DPA6NHR8 397 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 H0Y8X5 98 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 LATO43561 262 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 RNASEH2AO75792 299 aaKnown RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 MOCS3O95396 460 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 CAPNS1P04632 268 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 GOT1P17174 413 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 ADRA1BP35368 520 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 STAT1P42224 750 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 HDAC4P56524 1084 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 OGDHQ02218 1023 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 UBXN1Q04323 297 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 CNTN1Q12860 1018 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 ELAVL3Q14576 367 aaKnown RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 PPP1R15BQ5SWA1 713 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 WDR59Q6PJI9 974 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 SASS6Q6UVJ0 657 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 RAB44Q7Z6P3 723 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 NLRP14Q86W24 1093 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 PHF13Q86YI8 300 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 MARCH9Q86YJ5 346 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 NAXDQ8IW45 347 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 CCDC185Q8N715 623 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 PNPLA1Q8N8W4 532 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 OR2T34Q8NGX1 318 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 ARRDC3Q96B67 414 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 NAP1L5Q96NT1 182 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 GBP4Q96PP9 640 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 HAPLN3Q96S86 360 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 PDCL3Q9H2J4 239 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 NOL6Q9H6R4 1146 aaKnown RBP9.08□□□□□ -0.96
ATG4A-205ENST00000394892 VPS28Q9UK41 221 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 PCOLCE2Q9UKZ9 415 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 FZD4Q9ULV1 537 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 STAP1Q9ULZ2 295 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 CA5BQ9Y2D0 317 aa9.08□□□□□ -0.96
ATG4A-205ENST00000394892 CEP83Q9Y592 693 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms