RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 GBA3Q9H227 469 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 TASP1Q9H6P5 420 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 MRM3Q9HC36 420 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 TIMMDC1Q9NPL8 285 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 GDAP2Q9NXN4 497 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 CIDEBQ9UHD4 219 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 NPHS1O60500 1241 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 NR1H2P55055 460 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 INHBEP58166 350 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 PPIDQ08752 370 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 CDH17Q12864 832 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 ILF2Q12905 390 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 USP4Q13107 963 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 STX5Q13190 355 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 RNF111Q6ZNA4 994 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 OR52K1Q8NGK4 314 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 FAM81AQ8TBF8 368 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 KCTD13Q8WZ19 329 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 IRGQQ8WZA9 623 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 WNT8BQ93098 351 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 NT5C3BQ969T7 300 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 CCDC126Q96EE4 140 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 VPS39Q96JC1 886 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 GCNAQ96QF7 691 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 NPY6RQ99463 290 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 GPR22Q99680 433 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 EFHD1Q9BUP0 239 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 GATA5Q9BWX5 397 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 RHOJQ9H4E5 214 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 C20orf96Q9NUD7 363 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 TRIP11Q15643 1979 aa10.23□□□□□ -0.77
UBE2D3-208ENST00000394803 CAPN8A6NHC0 703 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 TRIM38O00635 465 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CXCL11O14625 94 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 DCLK1O15075 740 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 BCAS2O75934 225 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 PTPN3P26045 913 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 AXLP30530 894 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 TPI1P60174 286 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CCNA1P78396 465 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 SCAPQ12770 1279 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 VGLL4Q14135 290 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 ZNF423Q2M1K9 1284 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 USP41Q3LFD5 358 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 DCAF6Q58WW2 860 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 NOTUMQ6P988 496 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 SIX6OS1Q8N1H7 587 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 SHCBP1Q8NEM2 672 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 B4GALNT2Q8NHY0 566 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 PPTC7Q8NI37 304 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 EMID1Q96A84 441 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 HDAC11Q96DB2 347 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 SCYL1Q96KG9 808 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CDRT15Q96T59 188 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 MRPL1Q9BYD6 325 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 SHCBP1LQ9BZQ2 653 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 WDR41Q9HAD4 459 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 VTA1Q9NP79 307 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 SLC17A6Q9P2U8 582 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 AP4B1Q9Y6B7 739 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 A0A0G2JLL6 359 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 ZCWPW2A0A1B0GU75 182 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 M0QYT0 321 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 DNAJA2O60884 412 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 HUS1O60921 280 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 USP2O75604 605 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 GABBR2O75899 941 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 F9P00740 461 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 VTNP04004 478 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 PAMP19021 973 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CYP2B6P20813 491 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 TAF6P49848 677 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CREB5Q02930 508 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 ARHGAP1Q07960 439 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 LSM12Q3MHD2 195 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 IRAK1BP1Q5VVH5 260 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 KLC3Q6P597 504 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 BNIPLQ7Z465 357 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 PRRT2Q7Z6L0 340 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CCDC117Q8IWD4 279 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 TNS4Q8IZW8 715 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CEP70Q8NHQ1 597 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 CLEC4CQ8WTT0 213 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 GTF3C2Q8WUA4 911 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 LRRN4Q8WUT4 740 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 PTCD2Q8WV60 388 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 EZH1Q92800 747 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 OR52B2Q96RD2 323 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 HNRNPABQ99729 332 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 ZNF385DQ9H6B1 395 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 EML4Q9HC35 981 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 ZBTB26Q9HCK0 441 aa10.22□□□□□ -0.77
UBE2D3-208ENST00000394803 NCKIPSDQ9NZQ3 722 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms