RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 NRG1Q02297 640 aaPredicted RBP31.51■■■□□ 2.63
CMTM4-202ENST00000394106 GFPT1Q06210 699 aaPredicted RBP31.51■■■□□ 2.63
CMTM4-202ENST00000394106 MANEALQ5VSG8 457 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 USP30Q70CQ3 517 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 SH2D3CQ8N5H7 860 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 DCAF4L2Q8NA75 395 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 TSPY26PQ9H489 355 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 SERGEFQ9UGK8 458 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 SUSD2Q9UGT4 822 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 ADAMTS9Q9P2N4 1935 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 A0A1W2PP55 124 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 ILVBLA1L0T0 632 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 BNIP3LO60238 219 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 RNASEH2AO75792 299 aaKnown RBP31.5■■■□□ 2.63
CMTM4-202ENST00000394106 MT-CO1P00395 513 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 IL1BP01584 269 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 GZMAP12544 262 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 KCNA4P22459 653 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 SFSWAPQ12872 951 aaKnown RBP31.5■■■□□ 2.63
CMTM4-202ENST00000394106 LINGO4Q6UY18 593 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 Q6ZVU0 165 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 ATP11CQ8NB49 1132 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 TBC1D31Q96DN5 1066 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 OMDQ99983 421 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 XPO4Q9C0E2 1151 aaKnown RBP31.5■■■□□ 2.63
CMTM4-202ENST00000394106 PCED1AQ9H1Q7 454 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 SGK2Q9HBY8 427 aa31.5■■■□□ 2.63
CMTM4-202ENST00000394106 CBX4O00257 560 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 RTN2O75298 545 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 LRIG2O94898 1065 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 SRCP12931 536 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 GLDCP23378 1020 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 ZBED6P86452 979 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 EFHC2Q5JST6 749 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 PLEKHA7Q6IQ23 1121 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 ZNF783Q6ZMS7 281 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 TMC6Q7Z403 805 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 PYROXD2Q8N2H3 581 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 ZCCHC9Q8N567 271 aaKnown RBP31.49■■■□□ 2.63
CMTM4-202ENST00000394106 DNASE2BQ8WZ79 361 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 OR8D1Q8WZ84 308 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 ZNF653Q96CK0 615 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP31.49■■■□□ 2.63
CMTM4-202ENST00000394106 GTPBP2Q9BX10 602 aaKnown RBP31.49■■■□□ 2.63
CMTM4-202ENST00000394106 CAPN10Q9HC96 672 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 ATP13A1Q9HD20 1204 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 EIF2B4Q9UI10 523 aaKnown RBP31.49■■■□□ 2.63
CMTM4-202ENST00000394106 CAPN11Q9UMQ6 739 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 HS3ST2Q9Y278 367 aa31.49■■■□□ 2.63
CMTM4-202ENST00000394106 FAM47DPA6NHR8 397 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 K7ERQ8 282 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 CDX4O14627 284 aaPredicted RBP31.48■■■□□ 2.63
CMTM4-202ENST00000394106 ADH1BP00325 375 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 TPM3P06753 285 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 RHOQP17081 205 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 PSMA2P25787 234 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 GNA12Q03113 381 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 SCAPQ12770 1279 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 UAP1L1Q3KQV9 507 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 HGSNATQ68CP4 663 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 HDDC3Q8N4P3 179 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 SYN2Q92777 582 aaPredicted RBP31.48■■■□□ 2.63
CMTM4-202ENST00000394106 IQCDQ96DY2 449 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 NEUROG2Q9H2A3 272 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 CNOT8Q9UFF9 292 aaKnown RBP31.48■■■□□ 2.63
CMTM4-202ENST00000394106 DNAI1Q9UI46 699 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 LAMA1P25391 3075 aa31.48■■■□□ 2.63
CMTM4-202ENST00000394106 FSBPO95073 299 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 C5AR1P21730 350 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 ATXN3P54252 364 aaPredicted RBP31.47■■■□□ 2.63
CMTM4-202ENST00000394106 DAB2IPQ5VWQ8 1189 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 DSG4Q86SJ6 1040 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 AADATQ8N5Z0 425 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 NDFIP2Q9NV92 336 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 NEU3Q9UQ49 428 aa31.47■■■□□ 2.63
CMTM4-202ENST00000394106 LUC7L2Q9Y383 392 aaKnown RBP31.47■■■□□ 2.63
CMTM4-202ENST00000394106 BZW2Q9Y6E2 419 aaKnown RBP31.47■■■□□ 2.63
CMTM4-202ENST00000394106 MED19A0JLT2 244 aaPredicted RBP31.46■■■□□ 2.63
CMTM4-202ENST00000394106 GYPCP04921 128 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 FOXK2Q01167 660 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 PPM1JQ5JR12 505 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 NLRP14Q86W24 1093 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 TMEM248Q9NWD8 314 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 MYO1AQ9UBC5 1043 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 FZD10Q9ULW2 581 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 ZBTB32Q9Y2Y4 487 aaPredicted RBP31.46■■■□□ 2.63
CMTM4-202ENST00000394106 DNAH14Q0VDD8 3507 aa31.46■■■□□ 2.63
CMTM4-202ENST00000394106 PCDH15Q96QU1 1955 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 A0A1B0GTW7 788 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 TM4SF5O14894 197 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 SMAD6O43541 496 aaKnown RBP31.45■■■□□ 2.63
CMTM4-202ENST00000394106 SERPING1P05155 500 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 MAPKAPK2P49137 400 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 RETSATQ6NUM9 610 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 VPS36Q86VN1 386 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 RNF214Q8ND24 703 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 TRIM11Q96F44 468 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 ADAMTS1Q9UHI8 967 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 FZD4Q9ULV1 537 aa31.45■■■□□ 2.63
CMTM4-202ENST00000394106 ARHGAP33O14559 1287 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms