RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 TRAF3IP3Q9Y228 551 aa8.28□□□□□ -1.08
LIMS1-203ENST00000393310 STARD13Q9Y3M8 1113 aa8.28□□□□□ -1.08
LIMS1-203ENST00000393310 CPQQ9Y646 472 aa8.28□□□□□ -1.08
LIMS1-203ENST00000393310 ASS1P00966 412 aaKnown RBP8.27□□□□□ -1.08
LIMS1-203ENST00000393310 ALOX5P09917 674 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 SERPINB3P29508 390 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 ETV5P41161 510 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 MTIF2P46199 727 aaKnown RBP8.27□□□□□ -1.08
LIMS1-203ENST00000393310 ATP5OP48047 213 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 DHX34Q14147 1143 aaKnown RBP8.27□□□□□ -1.08
LIMS1-203ENST00000393310 FAM187BQ17R55 369 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 MEI1Q5TIA1 1274 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 PARM1Q6UWI2 310 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 ACOT1Q86TX2 421 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 SMYD1Q8NB12 490 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 TRIM39Q9HCM9 518 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 LZTFL1Q9NQ48 299 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 COL20A1Q9P218 1284 aa8.27□□□□□ -1.08
LIMS1-203ENST00000393310 CORO1CQ9ULV4 474 aaPredicted RBP8.27□□□□□ -1.08
LIMS1-203ENST00000393310 PACSIN2Q9UNF0 486 aaPredicted RBP8.27□□□□□ -1.08
LIMS1-203ENST00000393310 KAT6AQ92794 2004 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 TMEM247A6NEH6 219 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 F5H423 210 aaPredicted RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 ATP9BO43861 1147 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 RASGRP1O95267 797 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 IFNA14P01570 189 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 ADORA2BP29275 332 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 PRKAR1BP31321 381 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 MRPS25P82663 173 aaKnown RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 PRKAA1Q13131 559 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 SPARTQ8N0X7 666 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 CARNMT1Q8N4J0 409 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 RNASE11Q8TAA1 199 aaKnown RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 LRIG1Q96JA1 1093 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 PCDHA5Q9Y5H7 936 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 CYP26A1O43174 497 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 TMCC2O75069 709 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 ESRRBO95718 433 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 CEBPBP17676 345 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 RARRES1P49788 294 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 GNGT1P63211 74 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 PHEXP78562 749 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 DSC3Q14574 896 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 SEC23AQ15436 765 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 FSTL5Q8N475 847 aaPredicted RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 ZCCHC9Q8N567 271 aaKnown RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 GPR156Q8NFN8 814 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 STK32AQ8WU08 396 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 ANKRD27Q96NW4 1050 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 SERPINB11Q96P15 392 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 CMKLR1Q99788 373 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 KATNBL1Q9H079 304 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 DHX33Q9H6R0 707 aaKnown RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
LIMS1-203ENST00000393310 AIPL1Q9NZN9 384 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 CLEC1BQ9P126 229 aa8.27□□□□□ -1.09
LIMS1-203ENST00000393310 C9J4A7 227 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 SEMA4FO95754 770 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 CALB1P05937 261 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 PDGFRBP09619 1106 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 MAGEA11P43364 429 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 RAB14P61106 215 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 CXADRP78310 365 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 MGAT3Q09327 533 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 ILF3Q12906 894 aaKnown RBP eCLIP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 ARMC4Q5T2S8 1044 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 TANGO2Q6ICL3 276 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 C19orf48Q6RUI8 117 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 TPGS1Q6ZTW0 290 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 DYMQ7RTS9 669 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 PTAR1Q7Z6K3 402 aaPredicted RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 MIB1Q86YT6 1006 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 DHX40Q8IX18 779 aaKnown RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 HNRNPLLQ8WVV9 542 aaKnown RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 SLC39A7Q92504 469 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 NAF1Q96HR8 494 aaKnown RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 SECISBP2Q96T21 854 aaKnown RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 SAMD15Q9P1V8 674 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 MALT1Q9UDY8 824 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 CLCA2Q9UQC9 943 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 INVSQ9Y283 1065 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 TIMM13Q9Y5L4 95 aaPredicted RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 MYH3P11055 1940 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 GLP2RO95838 553 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 F9P00740 461 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 CTAGE8P0CG41 777 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 MAPTP10636 758 aaKnown RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 AMD1P17707 334 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 TNFAIP3P21580 790 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 HOXA6P31267 233 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 ADARP55265 1226 aaKnown RBP8.26□□□□□ -1.09
LIMS1-203ENST00000393310 CYP4F8P98187 520 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 RCN2Q14257 317 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 ELOCQ15369 112 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 ERCC6LQ2NKX8 1250 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 KRT71Q3SY84 523 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 ANKDD1AQ495B1 522 aa8.26□□□□□ -1.09
LIMS1-203ENST00000393310 FAM78AQ5JUQ0 283 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms