RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 HAUS5O94927 633 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 SPRP35270 261 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 LIMK2P53671 638 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 USP46P62068 366 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 ZBTB16Q05516 673 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 DBN1Q16643 649 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 ARID3BQ8IVW6 561 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 MAGEC3Q8TD91 643 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 ATXN7L3BQ96GX2 97 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 PRR11Q96HE9 360 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 SNX15Q9NRS6 342 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 C20orf96Q9NUD7 363 aaPredicted RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 KCNK4Q9NYG8 393 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 MPP6Q9NZW5 540 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 AAR2Q9Y312 384 aaKnown RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 PLXNA3P51805 1871 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 AP3B1O00203 1094 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 PRKCGP05129 697 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 NMBRP28336 390 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 GMPRP36959 345 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 RPL10AP62906 217 aaKnown RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 AFMIDQ63HM1 303 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 ICE2Q659A1 982 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 LHX8Q68G74 356 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 CMC1Q7Z7K0 106 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 KCNMB4Q86W47 210 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 RTL3Q8N8U3 475 aaKnown RBP26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 ISL2Q96A47 359 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 FCRL5Q96RD9 977 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 GLOD4Q9HC38 313 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 TMEM161AQ9NX61 479 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 PCDHB5Q9Y5E4 795 aa26.09■■□□□ 1.77
SMARCD3-203ENST00000392811 SYN3O14994 580 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 MT-CYBP00156 380 aaPredicted RBP26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 MAGEA12P43365 314 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 RASSF2P50749 326 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 MLLT6P55198 1093 aaPredicted RBP26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 NRG1Q02297 640 aaPredicted RBP26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 INSCQ1MX18 579 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 MBLAC2Q68D91 279 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 MSANTD2Q6P1R3 559 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 CEP57Q86XR8 500 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 CRLF3Q8IUI8 442 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 TTC9BQ8N6N2 239 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 FTHL17Q9BXU8 183 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 FBXO44Q9H4M3 255 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 GMIPQ9P107 970 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 TLR6Q9Y2C9 796 aa26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 NYNRINQ9P2P1 1898 aaKnown RBP26.08■■□□□ 1.77
SMARCD3-203ENST00000392811 VWA8A3KMH1 1905 aa26.08■■□□□ 1.76
SMARCD3-203ENST00000392811 TRAFD1O14545 582 aaPredicted RBP26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 PROCP04070 461 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 HSF5Q4G112 596 aaPredicted RBP26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 CTXN3Q4LDR2 81 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 PIK3R6Q5UE93 754 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 FSTL4Q6MZW2 842 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 PPP1R14CQ8TAE6 165 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 SLC39A13Q96H72 371 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 TBL1YQ9BQ87 522 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 ARL8BQ9NVJ2 186 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 TMEM216Q9P0N5 145 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 LNPEPQ9UIQ6 1025 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 E2F8A0AVK6 867 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 FGF3P11487 239 aaPredicted RBP26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 ABCG1P45844 678 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 SERPINB8P50452 374 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 PCLAFQ15004 111 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 LRRC8DQ7L1W4 858 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 ATAD1Q8NBU5 361 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 GPR152Q8TDT2 470 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 ZNF778Q96MU6 729 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 KIFC1Q9BW19 673 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 IARS2Q9NSE4 1012 aaKnown RBP26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 THAP1Q9NVV9 213 aa26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 MARCOQ9UEW3 520 aaPredicted RBP26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 HBS1LQ9Y450 684 aaKnown RBP26.07■■□□□ 1.76
SMARCD3-203ENST00000392811 ANXA9O76027 345 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 KITP10721 976 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 KCNA4P22459 653 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 DNAJB2P25686 324 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 FAM171A1Q5VUB5 890 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 IPMKQ8NFU5 416 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 B3GALT6Q96L58 329 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 C1orf74Q96LT6 269 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 TBC1D10AQ9BXI6 508 aa26.06■■□□□ 1.76
SMARCD3-203ENST00000392811 CCDC78A2IDD5 438 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 HLA-DQB2P05538 268 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 MAGEA11P43364 429 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 PAPOLAP51003 745 aaKnown RBP26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 MPP3Q13368 585 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 TTC7BQ86TV6 843 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 ALYREFQ86V81 257 aaKnown RBP26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 ARHGAP18Q8N392 663 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 PXYLP1Q8TE99 480 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 ZNF358Q9NW07 568 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 FCHO1O14526 889 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 HNRNPCL1O60812 293 aaKnown RBP26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 INHAP05111 366 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 PTPN4P29074 926 aa26.05■■□□□ 1.76
SMARCD3-203ENST00000392811 TBX4P57082 545 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms